RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SLC20A2Q08357 652 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 CC2D2BQ6DHV5 1058 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 PAXIP1Q6ZW49 1069 aaPredicted RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 NLRX1Q86UT6 975 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 PARP9Q8IXQ6 854 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ARHGEF2Q92974 986 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 ELMO3Q96BJ8 720 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 HAUS1Q96CS2 278 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 XPO6Q96QU8 1125 aaKnown RBP7.35□□□□□ -1.23
RTN4-203ENST00000357376 TMEM206Q9H813 350 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 SLC40A1Q9NP59 571 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 ANKFY1Q9P2R3 1169 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 PPP1R9AQ9ULJ8 1098 aa7.35□□□□□ -1.23
RTN4-203ENST00000357376 M0R2N6 131 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SLC16A3O15427 465 aaKnown RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 CLDN3O15551 220 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 RAD17O75943 681 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 COMTP21964 271 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 CHRNA3P32297 505 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SHMT1P34896 483 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 LIG4P49917 911 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 BFSP1Q12934 665 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 STRN3Q13033 797 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SHROOM1Q2M3G4 852 aaPredicted RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 EPC2Q52LR7 807 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 AADACL2Q6P093 401 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 ZFPM1Q8IX07 1006 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 LARGE2Q8N3Y3 721 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 ACTRT1Q8TDG2 376 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SLC20A1Q8WUM9 679 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SLC35C1Q96A29 364 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 CEP83Q9Y592 693 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 EIF4E1BA6NMX2 242 aaKnown RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 F8VZ95 297 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 PPP1R11O60927 126 aaPredicted RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 TMEM253P0C7T8 217 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 CD19P15391 556 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 PDE6BP35913 854 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SKOR1P84550 965 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 BYSLQ13895 437 aaKnown RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 CEP55Q53EZ4 464 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 LMBRD2Q68DH5 695 aaPredicted RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 EPS8L3Q8TE67 593 aaKnown RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 IWS1Q96ST2 819 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 GANQ9H2C0 597 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 KMT5AQ9NQR1 393 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 TTC7AQ9ULT0 858 aaPredicted RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 FAM187AA6NFU0 413 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 MMP10P09238 476 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 GBP1P32455 592 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 PCK1P35558 622 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 FLT3P36888 993 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 C2CD6Q53TS8 623 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 ARHGEF16Q5VV41 709 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 IQCKQ8N0W5 287 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 GRK7Q8WTQ7 553 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.34□□□□□ -1.23
RTN4-203ENST00000357376 CEP170P1Q96L14 293 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 AGPAT3Q9NRZ7 376 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 SCAF8Q9UPN6 1271 aaKnown RBP7.34□□□□□ -1.23
RTN4-203ENST00000357376 MYH8P13535 1937 aa7.34□□□□□ -1.23
RTN4-203ENST00000357376 BAZ2AQ9UIF9 1905 aaKnown RBP7.34□□□□□ -1.24
RTN4-203ENST00000357376 DDTLA6NHG4 134 aaPredicted RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 BRAFP15056 766 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 PIK3CAP42336 1068 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 SESN3P58005 492 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 DYNLT1P63172 113 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 MXRA7P84157 204 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 KRT17Q04695 432 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 DHX34Q14147 1143 aaKnown RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 ARHGEF26Q96DR7 871 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 DIS3Q9Y2L1 958 aaKnown RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 WDR91A4D1P6 747 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 LRRIQ4A6NIV6 560 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 TCP11X1B4DZS4 312 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 EML1O00423 815 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 PHF2O75151 1096 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 NEBLO76041 1014 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 SLC12A3P55017 1021 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 MYO1EQ12965 1108 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 ZRSR2Q15696 482 aaKnown RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 AGBL2Q5U5Z8 902 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 ZNF449Q6P9G9 518 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 ARHGAP27Q6ZUM4 889 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 TMC3Q7Z5M5 1100 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 NT5DC3Q86UY8 548 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 MAIP1Q8WWC4 291 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 TAS2R14Q9NYV8 317 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 DUOX1Q9NRD9 1551 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 TBX3O15119 743 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 PEX19P40855 299 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 ECE1P42892 770 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 MAPK7Q13164 816 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 ITGB3BPQ13352 177 aaPredicted RBP7.33□□□□□ -1.24
RTN4-203ENST00000357376 EPHA7Q15375 998 aa7.33□□□□□ -1.24
RTN4-203ENST00000357376 BARGINQ6ZT62 677 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms