RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MTRF1LQ9UGC7 380 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 COG5Q9UP83 839 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 NIP7Q9Y221 180 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 PFASO15067 1338 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
SMARCAL1-201ENST00000357276 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 RGPD4Q7Z3J3 1758 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 PECAM1P16284 738 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ATP4AP20648 1035 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 FGFR4P22455 802 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 LACTBP83111 547 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ATP11AP98196 1134 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 CYFIP1Q7L576 1253 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 GPBP1Q86WP2 473 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 APLFQ8IW19 511 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 SH3RF3Q8TEJ3 882 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 PARD3BQ8TEW8 1205 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ARHGEF26Q96DR7 871 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 TRIM33Q9UPN9 1127 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 TMEM120BA0PK00 339 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 SMIM23A6NLE4 172 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 BRD2P25440 801 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 SOX5P35711 763 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 PPP4CP60510 307 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 NBPF20Q3BBV1 942 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 GJB7Q6PEY0 223 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 TRMT10CQ7L0Y3 403 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 GCNT4Q9P109 453 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 KCNQ2O43526 872 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 GGPS1O95749 300 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 STAT1P42224 750 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLCO1A2P46721 670 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ZNF211Q13398 564 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 C11orf63Q6NUN7 778 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 LRMDAQ9H2I8 198 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 AAASQ9NRG9 546 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ETAA1Q9NY74 926 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 NKX1-2Q9UD57 310 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 KIAA1024Q9UPX6 916 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
SMARCAL1-201ENST00000357276 ASTN1O14525 1302 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 TCEA3O75764 348 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 CREB1P16220 341 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 PEX19P40855 299 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 RWDD2BP57060 319 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 MPP2Q14168 576 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 CCDC38Q502W7 563 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 ADAT2Q7Z6V5 191 aaKnown RBP13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 GLYCTKQ8IVS8 523 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 ENDOVQ8N8Q3 282 aaKnown RBP13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 C7orf43Q8WVR3 580 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 ANKRD63C9JTQ0 380 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 PEX5P50542 639 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 GIT2Q14161 759 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 LRRC14Q15048 493 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 AP1ARQ63HQ0 302 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 OSBPL1AQ9BXW6 950 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 STK33Q9BYT3 514 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 RNPEPL1Q9HAU8 725 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 CTNNAL1Q9UBT7 734 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 PCDHA12Q9UN75 941 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 ASB3Q9Y575 518 aa13.04□□□□□ -0.32
SMARCAL1-201ENST00000357276 ENO4A6NNW6 628 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 MIF4GDA9UHW6 222 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 PEX11AO75192 247 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 EYA4O95677 639 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 CALB2P22676 271 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 RXRBP28702 533 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 RRP1BQ14684 758 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 LBRQ14739 615 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 MTFR1Q15390 333 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 TAF11Q15544 211 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 AADACL2Q6P093 401 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 ECHDC2Q86YB7 292 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 CTNNBL1Q8WYA6 563 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 ARHGEF2Q92974 986 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 GJA10Q969M2 543 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms