RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GTF2IP78347 998 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLC29A2Q14542 456 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 SEPT2Q15019 361 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZC2HC1CQ53FD0 456 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 C10orf76Q5T2E6 689 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARMC9Q7Z3E5 817 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCT6BQ92526 530 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 CNKSR1Q969H4 720 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 C18orf8Q96DM3 657 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 XPO6Q96QU8 1125 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 RAB17Q9H0T7 212 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ERVK-5Q9HDB9 667 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 CD209Q9NNX6 404 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM114A2Q9NRY5 505 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 INTS9Q9NV88 658 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 DNAJC17Q9NVM6 304 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 SAMD15Q9P1V8 674 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PCDHA2Q9Y5H9 948 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 NHSL1Q5SYE7 1610 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 A0A1B0GVG6 124 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 EIF4E1BA6NMX2 242 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PPIP5K2O43314 1243 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRIM37O94972 964 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 TTLL1O95922 423 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PLCG2P16885 1265 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 SCNN1DP51172 638 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PMS2P54278 862 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 PPP1R15BQ5SWA1 713 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 UBAP2Q5T6F2 1119 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZNF746Q6NUN9 644 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 MAEAQ7L5Y9 396 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 HOOK3Q86VS8 718 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRIM42Q8IWZ5 723 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 MYCT1Q8N699 235 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 NEK9Q8TD19 979 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 THAP2Q9H0W7 228 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 MMADHCQ9H3L0 296 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 TAS2R14Q9NYV8 317 aa8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 DBR1Q9UK59 544 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-201ENST00000357235 IGSF9BQ9UPX0 1349 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SNED1Q8TER0 1413 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 DPPA5A6NC42 116 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZBTB5O15062 677 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 RPL13P26373 211 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 CNGA1P29973 690 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 NMT1P30419 496 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SCNN1BP51168 640 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZNF543Q08ER8 600 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ORC2Q13416 577 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 GIT2Q14161 759 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 DRAP1Q14919 205 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 EDRF1Q3B7T1 1238 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 NUGGCQ68CJ6 796 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 TEX9Q8N6V9 391 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 EPS8L3Q8TE67 593 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 RPGRQ92834 1020 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 DTNBP1Q96EV8 351 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 MTFR1LQ9H019 292 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SEMA4AQ9H3S1 761 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLITRK6Q9H5Y7 841 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 CTTNBP2NLQ9P2B4 639 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 DNAJC12Q9UKB3 198 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 OATP04181 439 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCND1P24385 295 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 HOXA13P31271 388 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ABL2P42684 1182 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 TCP10Q12799 353 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 COG2Q14746 738 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SETDB1Q15047 1291 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLC10A5Q5PT55 438 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 AGBL2Q5U5Z8 902 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZNF772Q68DY9 489 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 FRMD5Q7Z6J6 570 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 PALB2Q86YC2 1186 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 TPH2Q8IWU9 490 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 LRRC34Q8IZ02 419 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 MIPOL1Q8TD10 442 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.87□□□□□ -0.997e-9■■■■■ 72.6
CDC42SE1-201ENST00000357235 SLC35C1Q96A29 364 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ARHGEF26Q96DR7 871 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ANO3Q9BYT9 981 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 SUCLA2Q9P2R7 463 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 STK38LQ9Y2H1 464 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 C2CD2Q9Y426 696 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 ROBO3Q96MS0 1386 aa8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 MYH14Q7Z406 1995 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-201ENST00000357235 GPR75-ASB3A0A0A6YYF3 556 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 ZBTB39O15060 712 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CREB3O43889 395 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM13AO94988 1023 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 DRD4P21917 467 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 KCNJ1P48048 391 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLC12A3P55017 1021 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 GPSM2P81274 684 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 CTTNQ14247 550 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 MESDQ14696 234 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 EPHA7Q15375 998 aa8.86□□□□□ -0.99
CDC42SE1-201ENST00000357235 TAF11Q15544 211 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms