RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SAYSD1Q9NPB0 183 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 PTPRKQ15262 1439 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 H0Y626 953 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 H0YC42 278 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 TRIM16O95361 564 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 CHRNA3P32297 505 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 STXBP2Q15833 593 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 GRAMD1CQ8IYS0 662 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 THAP11Q96EK4 314 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 NNMTP40261 264 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 KRR1Q13601 381 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 DMC1Q14565 340 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 ALCAMQ13740 583 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 CCT8L2Q96SF2 557 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 TSC22D4Q9Y3Q8 395 aa12.22□□□□□ -0.45
SPTBN1-202ENST00000356805 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 SLC27A3Q5K4L6 730 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 KHDRBS2Q5VWX1 349 aaKnown RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 BLOC1S6Q9UL45 172 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF804BA4D1E1 1349 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 KIF1BO60333 1816 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 AGTP01019 485 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 FAM210AQ96ND0 272 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 TGS1Q96RS0 853 aaKnown RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 FAM129AQ9BZQ8 928 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 GPR108Q9NPR9 543 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 SYNMO15061 1565 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 OTUB1Q96FW1 271 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 UBE4BO95155 1302 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 NME3Q13232 169 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF229Q9UJW7 825 aa12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 SMG5Q9UPR3 1016 aaKnown RBP12.21□□□□□ -0.45
SPTBN1-202ENST00000356805 hCG_2014768A0A024R1R8 64 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 SLC9A1P19634 815 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 POTEAQ6S8J7 498 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 RFX8Q6ZV50 586 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 UBA6A0AVT1 1052 aaPredicted RBP12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 HOXA13P31271 388 aaPredicted RBP12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 HSPA13P48723 471 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 KIF23Q02241 960 aaPredicted RBP12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 WASHC5Q12768 1159 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 RESTQ13127 1097 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 SUPT20HL1Q3ZLR7 823 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 TTC13Q8NBP0 860 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 DBNDD1Q9H9R9 158 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 LGALS16A8MUM7 142 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 FAM107AO95990 144 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 VPS11Q9H270 941 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 KDM4CQ9H3R0 1056 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 NDST4Q9H3R1 872 aa12.21□□□□□ -0.46
SPTBN1-202ENST00000356805 KPNA7A9QM74 516 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 ARL4CP56559 192 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 AGBL2Q5U5Z8 902 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 ZBTB38Q8NAP3 1195 aaPredicted RBP12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 COA7Q96BR5 231 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 RNF103-CHMP3A0A140T963 221 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 CENPAP49450 140 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 MAPRE2Q15555 327 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 CNGA3Q16281 694 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 K7ERI5 159 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 IMPDH2P12268 514 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 KRT31Q15323 416 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 ASIC4Q96FT7 647 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 SLC13A1Q9BZW2 595 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 DDX28Q9NUL7 540 aaKnown RBP12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 C16orf96A6NNT2 1141 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 FGGP02679 453 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 DEFA1P59665 94 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 DEFA3P59666 94 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 TAS2R42Q7RTR8 314 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 RUBCNLQ9H714 662 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 SP110Q9HB58 689 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 GID8Q9NWU2 228 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 A0A1W2PQC6 194 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 ANGPT1Q15389 498 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 DEPDC1Q5TB30 811 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 RFWD2Q8NHY2 731 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 DNAJC9Q8WXX5 260 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 DYRK4Q9NR20 520 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 MYO1DO94832 1006 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 KRT72Q14CN4 511 aa12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
SPTBN1-202ENST00000356805 TERB1Q8NA31 727 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms