RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 NBNO60934 754 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 MAFO75444 373 aaPredicted RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SLITRK3O94933 977 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CTSHP09668 335 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SPATA31C1P0DKV0 1188 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SNRPBP14678 240 aaKnown RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CLCN3P51790 818 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 POLGP54098 1239 aaPredicted RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 STK38Q15208 465 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 IL17AQ16552 155 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 TMEM119Q4V9L6 283 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 XKR9Q5GH70 373 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 TMEM240Q5SV17 173 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 ODR4Q5SWX8 454 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 RASIP1Q5U651 963 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 IER5Q5VY09 327 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 TSHZ1Q6ZSZ6 1077 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 DNAJB3Q8WWF6 145 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 TCP11Q8WWU5 503 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SEPT8Q92599 483 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CEP170P1Q96L14 293 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 RNPC3Q96LT9 517 aaKnown RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 NACC1Q96RE7 527 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 USP28Q96RU2 1077 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 NT5C3AQ9H0P0 336 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 ATP6V0A4Q9HBG4 840 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 FBXO2Q9UK22 296 aaPredicted RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CLIC4Q9Y696 253 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 GBF1Q92538 1859 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 ARHGEF35A5YM69 484 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 TMEM150BA6NC51 233 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 PPP6R2O75170 966 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 RARRES1P49788 294 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 DNM2P50570 870 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 EPHB4P54760 987 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 MBTPS1Q14703 1052 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 PLEKHG4Q58EX7 1191 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 FBXO47Q5MNV8 452 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 EFCAB12Q6NXP0 572 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 TRIM46Q7Z4K8 759 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CABP7Q86V35 215 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 ZNF410Q86VK4 478 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CATSPER3Q86XQ3 398 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 KIAA0319LQ8IZA0 1049 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 MCPH1Q8NEM0 835 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SLC7A3Q8WY07 619 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 VWCEQ96DN2 955 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.42□□□□□ -1.72e-7■■■□□ 14.8
CNOT4-202ENST00000356162 MMTAG2Q9BU76 263 aaKnown RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 KLF16Q9BXK1 252 aaPredicted RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 CELF4Q9BZC1 486 aaKnown RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 FTOQ9C0B1 505 aaKnown RBP eCLIP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 AKT3Q9Y243 479 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 ATP6V1DQ9Y5K8 247 aa4.42□□□□□ -1.7
CNOT4-202ENST00000356162 SRPRBQ9Y5M8 271 aaKnown RBP4.42□□□□□ -1.7
CNOT4-202ENST00000356162 ABHD14A-ACY1A0A1B0GW23 586 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 PP2D1A8MPX8 630 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 EYA4O95677 639 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 FGBP02675 491 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 CHRNA1P02708 482 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 ACRP10323 421 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 GHRP10912 638 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 BMP1P13497 986 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 DDIT3P35638 169 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 TXLNAP40222 546 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 GRM5P41594 1212 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 GPC3P51654 580 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 CRYBB1P53674 252 aaPredicted RBP4.41□□□□□ -1.7
CNOT4-202ENST00000356162 NPEPPSP55786 919 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 NUCB2P80303 420 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 PKP1Q13835 747 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 LPIN1Q14693 890 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 GPNMBQ14956 572 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 LRIT3Q3SXY7 679 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 C9orf50Q5SZB4 431 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 FAM173BQ6P4H8 233 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 ZNF365Q70YC5 407 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 DEFB128Q7Z7B8 93 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 LRRC71Q8N4P6 559 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 METTL13Q8N6R0 699 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 LINC00301Q8NCQ3 95 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 KCNG4Q8TDN1 519 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 PSPC1Q8WXF1 523 aaKnown RBP4.41□□□□□ -1.7
CNOT4-202ENST00000356162 ZBTB10Q96DT7 871 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 CALML4Q96GE6 196 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 CDK5RAP3Q96JB5 506 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 SLC9A7Q96T83 725 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 TIPINQ9BVW5 301 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 CCSER1Q9C0I3 900 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 ERVK-5Q9HDB9 667 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 XPNPEP1Q9NQW7 623 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 DDX19AQ9NUU7 478 aaKnown RBP4.41□□□□□ -1.7
CNOT4-202ENST00000356162 CENPFP49454 3210 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 TET1Q8NFU7 2136 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 RALGAPA2Q2PPJ7 1873 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 SPTLC2O15270 562 aa4.41□□□□□ -1.7
CNOT4-202ENST00000356162 ASAP2O43150 1006 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms