RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZBTB5O15062 677 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 CLSTN1O94985 981 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 KRT16P08779 473 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 FERP16591 822 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 SLC8A1P32418 973 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 PPATQ06203 517 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 IKQ13123 557 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 SLC17A8Q8NDX2 589 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 KAT5Q92993 513 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 SLC12A4Q9UP95 1085 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 CALCAP01258 141 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 EIF3BP55884 814 aaKnown RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 GTF2IP78347 998 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 RNASELQ05823 741 aaKnown RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 ORC2Q13416 577 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 AUHQ13825 339 aaKnown RBP10.94□□□□□ -0.66
PTPRA-203ENST00000356147 EXOC3L1Q86VI1 746 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 ERICH1Q86X53 443 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 CCDC50Q8IVM0 306 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 C3orf20Q8ND61 904 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 SLC30A5Q8TAD4 765 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 C1orf54Q8WWF1 131 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 SH2D3AQ9BRG2 576 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 PCIF1Q9H4Z3 704 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 ATP6V0A4Q9HBG4 840 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 DDX60LQ5H9U9 1706 aaKnown RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 FTLP02792 175 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 RARAP10276 462 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PYGMP11217 842 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 VCAM1P19320 739 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PTGIRP43119 386 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 NCALDP61601 193 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 CNGA2Q16280 664 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 ARMC9Q7Z3E5 817 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 KLHL29Q96CT2 875 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 CRAMP1Q96RY5 1269 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PAIP2Q9BPZ3 127 aaKnown RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 KCNMB3Q9NPA1 279 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 TYW1Q9NV66 732 aaKnown RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 A0A1B0GUA9 196 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 TMEM120BA0PK00 339 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PDXKO00764 312 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 RIPK2O43353 540 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 TTLL1O95922 423 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 GHRP10912 638 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 FMO5P49326 533 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 DLG4P78352 724 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 MAP2K1Q02750 393 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 TCP10Q12799 353 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 HYIQ5T013 277 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PHLDB3Q6NSJ2 640 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 FAM47EQ6ZV65 393 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PRUNE1Q86TP1 453 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 ZC3H3Q8IXZ2 948 aaKnown RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 GPR88Q9GZN0 384 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 SNX3O60493 162 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 NUDT17P0C025 328 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 DLATP10515 647 aaKnown RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 COMTP21964 271 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 MPP2Q14168 576 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 SYT2Q8N9I0 419 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 ARHGEF2Q92974 986 aaKnown RBP10.93□□□□□ -0.66
PTPRA-203ENST00000356147 RMDN2Q96LZ7 410 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 CARD9Q9H257 536 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 DAGLAQ9Y4D2 1042 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 PFASO15067 1338 aa10.93□□□□□ -0.66
PTPRA-203ENST00000356147 KIF1CO43896 1103 aaKnown RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 FAM13AO94988 1023 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 TMEM253P0C7T8 217 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 NQO1P15559 274 aaKnown RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 LMNB1P20700 586 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 RPL13P26373 211 aaKnown RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 DAB2IPQ5VWQ8 1189 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 EPM2AIP1Q7L775 607 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 MICAL1Q8TDZ2 1067 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 SPDL1Q96EA4 605 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 PGM2Q96G03 612 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 RSRC1Q96IZ7 334 aaKnown RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 ZNF570Q96NI8 536 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 NYXQ9GZU5 481 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 UBE2TQ9NPD8 197 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 A0A0A6YYK5 440 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-203ENST00000356147 CCDC189A1A4V9 331 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 ASAP2O43150 1006 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 PHF2O75151 1096 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 CHKAP35790 457 aa10.92□□□□□ -0.66
PTPRA-203ENST00000356147 ZNF76P36508 570 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms