RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FMNL3Q8IVF7 1028 aa18.81■□□□□ 0.6
VPS13B-201ENST00000355155 DESI2Q9BSY9 194 aa18.81■□□□□ 0.6
VPS13B-201ENST00000355155 MLXIPQ9HAP2 919 aa18.81■□□□□ 0.6
VPS13B-201ENST00000355155 C1orf220Q5T0J3 134 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 CDCA2Q69YH5 1023 aaPredicted RBP18.8■□□□□ 0.6
VPS13B-201ENST00000355155 ANKRD13CQ8N6S4 541 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 LMO3Q8TAP4 145 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 DENND3A2RUS2 1198 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 FANCGO15287 622 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 PJA2O43164 708 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 CLDN10P78369 228 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 MORN1Q5T089 497 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 COL1A2P08123 1366 aa18.8■□□□□ 0.6
VPS13B-201ENST00000355155 RIOK3O14730 519 aaKnown RBP18.79■□□□□ 0.6
VPS13B-201ENST00000355155 TLR2O60603 784 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 GLRA2P23416 452 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 POLGP54098 1239 aaPredicted RBP18.79■□□□□ 0.6
VPS13B-201ENST00000355155 TUBB2AQ13885 445 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 IER5Q5VY09 327 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
VPS13B-201ENST00000355155 JPH2Q9BR39 696 aaPredicted RBP18.79■□□□□ 0.6
VPS13B-201ENST00000355155 TUBB2BQ9BVA1 445 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 SMARCAD1Q9H4L7 1026 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 KIAA1586Q9HCI6 787 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
VPS13B-201ENST00000355155 NENFQ9UMX5 172 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 BZW2Q9Y6E2 419 aaKnown RBP18.79■□□□□ 0.6
VPS13B-201ENST00000355155 DYNC1I1O14576 645 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 EXOC3O60645 756 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 HOXC6P09630 235 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 UCHL3P15374 230 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 INHBEP58166 350 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 MAEAQ7L5Y9 396 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 PLEKHH3Q7Z736 793 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 ACRBPQ8NEB7 543 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 COQ4Q9Y3A0 265 aa18.79■□□□□ 0.6
VPS13B-201ENST00000355155 GFPT2O94808 682 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 CNGA1P29973 690 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 POU5F1BQ06416 359 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 PLCB4Q15147 1175 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 RRAGAQ7L523 313 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 DHX37Q8IY37 1157 aaKnown RBP18.78■□□□□ 0.6
VPS13B-201ENST00000355155 PPTC7Q8NI37 304 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 TCP11Q8WWU5 503 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 AZI2Q9H6S1 392 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 SNAI1O95863 264 aaPredicted RBP18.78■□□□□ 0.6
VPS13B-201ENST00000355155 VAMP7P51809 220 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 HSDL1Q3SXM5 330 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 EPC2Q52LR7 807 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 SYT10Q6XYQ8 523 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 CACNA2D4Q7Z3S7 1137 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 ASAP3Q8TDY4 903 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 SLC7A3Q8WY07 619 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 USP6NLQ92738 828 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 MAML3Q96JK9 1138 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 TSGA10Q9BZW7 698 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 NMRK2Q9NPI5 230 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 ANKRD63C9JTQ0 380 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 SLC10A3P09131 477 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 TXNP10599 105 aaKnown RBP18.78■□□□□ 0.6
VPS13B-201ENST00000355155 KRT13P13646 458 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 CYP2J2P51589 502 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 HHIPL1Q96JK4 782 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 SH2D3AQ9BRG2 576 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 CCDC113Q9H0I3 377 aa18.78■□□□□ 0.6
VPS13B-201ENST00000355155 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.78■□□□□ 0.6
VPS13B-201ENST00000355155 HBP1O60381 514 aa18.77■□□□□ 0.6
VPS13B-201ENST00000355155 GH1P01241 217 aa18.77■□□□□ 0.6
VPS13B-201ENST00000355155 SLC9A1P19634 815 aa18.77■□□□□ 0.6
VPS13B-201ENST00000355155 VAV2P52735 878 aa18.77■□□□□ 0.6
VPS13B-201ENST00000355155 IRF2BP2Q7Z5L9 587 aa18.77■□□□□ 0.6
VPS13B-201ENST00000355155 NFKBIZQ9BYH8 718 aa18.77■□□□□ 0.6
VPS13B-201ENST00000355155 CCDC169A6NNP5 214 aa18.77■□□□□ 0.59
VPS13B-201ENST00000355155 ZNF263O14978 683 aa18.77■□□□□ 0.59
VPS13B-201ENST00000355155 POLR2FP61218 127 aaKnown RBP18.77■□□□□ 0.59
VPS13B-201ENST00000355155 SLC9C1Q4G0N8 1177 aa18.77■□□□□ 0.59
VPS13B-201ENST00000355155 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.59
VPS13B-201ENST00000355155 EHBP1Q8NDI1 1231 aa18.77■□□□□ 0.59
VPS13B-201ENST00000355155 SPATA33Q96N06 139 aa18.77■□□□□ 0.59
VPS13B-201ENST00000355155 DCAF17Q5H9S7 520 aaPredicted RBP18.76■□□□□ 0.59
VPS13B-201ENST00000355155 STK33Q9BYT3 514 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 ADCY3O60266 1144 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 CBWD6Q4V339 395 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 CBWD3Q5JTY5 395 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 ZNF484Q5JVG2 852 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 CBWD5Q5RIA9 395 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 C10orf76Q5T2E6 689 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 IFNLR1Q8IU57 520 aaPredicted RBP18.76■□□□□ 0.59
VPS13B-201ENST00000355155 PLEKHO2Q8TD55 490 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 IVNS1ABPQ9Y6Y0 642 aa18.76■□□□□ 0.59
VPS13B-201ENST00000355155 MGAMO43451 1857 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 UQCRHLA0A096LP55 91 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 BTNL10A8MVZ5 291 aa18.75■□□□□ 0.59
VPS13B-201ENST00000355155 UQCRHP07919 91 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms