RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SNAP25P60880 206 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 USPL1Q5W0Q7 1092 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 TMEM270Q6UE05 265 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 RMDN1Q96DB5 314 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 PIGSQ96S52 555 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 TARSL2A2RTX5 802 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 NPM3O75607 178 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 GPC5P78333 572 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 PTPN21Q16825 1174 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 NDE1Q9NXR1 346 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 PKD2L2Q9NZM6 624 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 USP17L3A6NCW0 530 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 USP17L4A6NCW7 530 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 ABCE1P61221 599 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 CYP27A1Q02318 531 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 C16orf72Q14CZ0 275 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 MAPRE2Q15555 327 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 SMAD1Q15797 465 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 USP17L1Q7RTZ2 530 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 ARMC2Q8NEN0 867 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 USE1Q9NZ43 259 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 NBNO60934 754 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 CACNB2Q08289 660 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 UBE2SQ16763 222 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 HEATR6Q6AI08 1181 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 ATXN7L3BQ96GX2 97 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 NDEL1Q9GZM8 345 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 TMEM245Q9H330 911 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 PCDHB8Q9UN66 801 aa6.14□□□□□ -1.43
SRGAP1-201ENST00000355086 TMEM35BQ8NCS4 154 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 A0A1W2PQD8 194 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 RALAP11233 206 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 HMOX2P30519 316 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 TMC4Q7Z404 712 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ORAI2Q96SN7 254 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PYCARDQ9ULZ3 195 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 EDC4Q6P2E9 1401 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 A2MP01023 1474 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 WDR47O94967 919 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ALDH1A1P00352 501 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 CYBBP04839 570 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ZNF555Q8NEP9 628 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 SH3TC2Q8TF17 1288 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 M0QYV0 167 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 SUPT3HO75486 399 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 EMBQ6PCB8 327 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PANX2Q96RD6 677 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PARD3Q8TEW0 1356 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 IKBKBO14920 756 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 TLR2O60603 784 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 MTMR1Q13613 665 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 INPP5AQ14642 412 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PPP1R36Q96LQ0 422 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 TRPC7Q9HCX4 862 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 HPCAP84074 193 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 GPT2Q8TD30 523 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 FAM161BQ96MY7 647 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 OLFML3Q9NRN5 406 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 H2AFY2Q9P0M6 372 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 STAP1Q9ULZ2 295 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PYGMP11217 842 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 NDST4Q9H3R1 872 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 SRPRBQ9Y5M8 271 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 NCALDP61601 193 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 DPCR1Q3MIW9 517 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 BEND6Q5SZJ8 279 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 KIF2CQ99661 725 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PCSK1NQ9UHG2 260 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ATP10DQ9P241 1426 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 GNA15P30679 374 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 CCDC142Q17RM4 750 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 APOA5Q6Q788 366 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 BTNL9Q6UXG8 535 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 SCFD1Q8WVM8 642 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 NRBP1Q9UHY1 535 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 DYNLL1P63167 89 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 NR1H3Q13133 447 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PGBD3Q8N328 593 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PPP2R3CQ969Q6 453 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 hCG_2014768A0A024R1R8 64 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ZNF500O60304 480 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 MOCS2O96007 188 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 HNRNPCP07910 306 aaKnown RBP eCLIP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 BRD2P25440 801 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 ITPRIPL1Q6GPH6 555 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 C2orf69Q8N8R5 385 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 AGR3Q8TD06 166 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PSD3Q9NYI0 1048 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 MAP3K20Q9NYL2 800 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 IP6K2Q9UHH9 426 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 PIK3C2GO75747 1445 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 KRT31Q15323 416 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 CEP55Q53EZ4 464 aa6.13□□□□□ -1.43
SRGAP1-201ENST00000355086 CEP78Q5JTW2 689 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms