RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
PDGFA-201ENST00000354513 PIN4Q9Y237 131 aaKnown RBP17.8■□□□□ 0.44
PDGFA-201ENST00000354513 SFPQP23246 707 aaKnown RBP eCLIP17.79■□□□□ 0.44
PDGFA-201ENST00000354513 NEK8Q86SG6 692 aa17.79■□□□□ 0.44
PDGFA-201ENST00000354513 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
PDGFA-201ENST00000354513 NLRP4Q96MN2 994 aa17.79■□□□□ 0.44
PDGFA-201ENST00000354513 MRPL9Q9BYD2 267 aaKnown RBP17.79■□□□□ 0.44
PDGFA-201ENST00000354513 DHX33Q9H6R0 707 aaKnown RBP17.79■□□□□ 0.44
PDGFA-201ENST00000354513 AGPAT5Q9NUQ2 364 aa17.79■□□□□ 0.44
PDGFA-201ENST00000354513 DNAJB4Q9UDY4 337 aa17.79■□□□□ 0.44
PDGFA-201ENST00000354513 PFKFB2O60825 505 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 ZNF623O75123 536 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 ZC3H11AO75152 810 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDGFA-201ENST00000354513 OFD1O75665 1012 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 QARSP47897 775 aaKnown RBP17.78■□□□□ 0.44
PDGFA-201ENST00000354513 AFF1P51825 1210 aaKnown RBP17.78■□□□□ 0.44
PDGFA-201ENST00000354513 KRT17Q04695 432 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 UBXN11Q5T124 520 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 IER5LQ5T953 404 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 TWF2Q6IBS0 349 aaKnown RBP17.78■□□□□ 0.44
PDGFA-201ENST00000354513 PPP4R3AQ6IN85 833 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 AGMOQ6ZNB7 445 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 TNFRSF25Q93038 417 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 MFSD14AQ96MC6 490 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 POMKQ9H5K3 350 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 COL4A3BPQ9Y5P4 624 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 USP34Q70CQ2 3546 aa17.78■□□□□ 0.44
PDGFA-201ENST00000354513 MTCL1Q9Y4B5 1905 aaKnown RBP17.78■□□□□ 0.44
PDGFA-201ENST00000354513 LARGE1O95461 756 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 GALTP07902 379 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 SRGAP2BP0DMP2 458 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 FDPSP14324 419 aaKnown RBP17.77■□□□□ 0.44
PDGFA-201ENST00000354513 SP100P23497 879 aaPredicted RBP17.77■□□□□ 0.44
PDGFA-201ENST00000354513 SLC11A1P49279 550 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 DNM2P50570 870 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 CDC42EP1Q00587 391 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 PTPN21Q16825 1174 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 KANK3Q6NY19 840 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 CATSPER4Q7RTX7 472 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 CASP10Q92851 521 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 TMEM143Q96AN5 459 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 IGSF21Q96ID5 467 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 FAM20AQ96MK3 541 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 PHOX2BQ99453 314 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 BMP2KQ9NSY1 1161 aaPredicted RBP17.77■□□□□ 0.44
PDGFA-201ENST00000354513 RGL1Q9NZL6 768 aa17.77■□□□□ 0.44
PDGFA-201ENST00000354513 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 WNT7AO00755 349 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 ZBTB39O15060 712 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 GCFC2P16383 781 aaKnown RBP17.76■□□□□ 0.43
PDGFA-201ENST00000354513 HOXB8P17481 243 aaPredicted RBP17.76■□□□□ 0.43
PDGFA-201ENST00000354513 HOXA11P31270 313 aaPredicted RBP17.76■□□□□ 0.43
PDGFA-201ENST00000354513 MRE11P49959 708 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 VCPP55072 806 aaKnown RBP17.76■□□□□ 0.43
PDGFA-201ENST00000354513 SIGLEC14Q08ET2 396 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 NOMO2Q5JPE7 1267 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 CPLX2Q6PUV4 134 aaKnown RBP17.76■□□□□ 0.43
PDGFA-201ENST00000354513 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 ZNF280BQ86YH2 543 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 VPS52Q8N1B4 723 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 SLC22A17Q8WUG5 538 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 PRPF31Q8WWY3 499 aaKnown RBP17.76■□□□□ 0.43
PDGFA-201ENST00000354513 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 LXNQ9BS40 222 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 XPNPEP1Q9NQW7 623 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 INPP5FQ9Y2H2 1132 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 IRAK3Q9Y616 596 aa17.76■□□□□ 0.43
PDGFA-201ENST00000354513 C2CD4DB7Z1M9 353 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 TBX3O15119 743 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 CCNT1O60563 726 aaKnown RBP17.75■□□□□ 0.43
PDGFA-201ENST00000354513 DDHD2O94830 711 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 P4HBP07237 508 aaKnown RBP17.75■□□□□ 0.43
PDGFA-201ENST00000354513 WEE2P0C1S8 567 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 CTSAP10619 480 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 EPCAMP16422 314 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 RAB27AP51159 221 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 NR5A1Q13285 461 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 EPHA7Q15375 998 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 MRPL10Q7Z7H8 261 aaKnown RBP17.75■□□□□ 0.43
PDGFA-201ENST00000354513 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
PDGFA-201ENST00000354513 C4orf19Q8IY42 314 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 C12orf76Q8N812 135 aaPredicted RBP17.75■□□□□ 0.43
PDGFA-201ENST00000354513 PBXIP1Q96AQ6 731 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 DYDC2Q96IM9 177 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 CEP170P1Q96L14 293 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 INO80BQ9C086 356 aaPredicted RBP17.75■□□□□ 0.43
PDGFA-201ENST00000354513 ADAM7Q9H2U9 754 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 PCDHB2Q9Y5E7 798 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 PIEZO1Q92508 2521 aa17.75■□□□□ 0.43
PDGFA-201ENST00000354513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.74■□□□□ 0.43
PDGFA-201ENST00000354513 CXCL14O95715 111 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 PDGFBP01127 241 aaPredicted RBP17.74■□□□□ 0.43
PDGFA-201ENST00000354513 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
PDGFA-201ENST00000354513 POLGP54098 1239 aaPredicted RBP17.74■□□□□ 0.43
PDGFA-201ENST00000354513 AK2P54819 239 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 LAMTOR4Q0VGL1 99 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 TCF15Q12870 199 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 EMC2Q15006 297 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
PDGFA-201ENST00000354513 GLB1LQ6UWU2 654 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms