RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CAPZA2P47755 286 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 MYRIPQ8NFW9 859 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 KLC2Q9H0B6 622 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 RPAP3Q9H6T3 665 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PIH1D3Q9NQM4 214 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 V9GYQ6 96 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 GOLGA8RI6L899 631 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 GFPT1Q06210 699 aaPredicted RBP10.63□□□□□ -0.71
COL11A1-201ENST00000353414 ALKBH2Q6NS38 261 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 EFHBQ8N7U6 833 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 TTC8Q8TAM2 541 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 SPZ1Q9BXG8 430 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 STK17AQ9UEE5 414 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 MCF2P10911 925 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 PHKA2P46019 1235 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 C16orf87Q6PH81 154 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 ANKMY2Q8IV38 441 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 TRIM11Q96F44 468 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 EFHD1Q9BUP0 239 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 ADAM22Q9P0K1 906 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 TCP1P17987 556 aaKnown RBP10.63□□□□□ -0.71
COL11A1-201ENST00000353414 CA4P22748 312 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 BTBD8Q5XKL5 378 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 TMEM161AQ9NX61 479 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 MRPL42Q9Y6G3 142 aaKnown RBP10.63□□□□□ -0.71
COL11A1-201ENST00000353414 SPTLC1O15269 473 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 GRAP2O75791 330 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 COPS2P61201 443 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 SLC25A41Q8N5S1 370 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 ZMYND12Q9H0C1 365 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 ARHGEF37A1IGU5 675 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 F8W8V4 182 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 KCNA2P16389 499 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 KPNA2P52292 529 aaKnown RBP10.63□□□□□ -0.71
COL11A1-201ENST00000353414 TTLL4Q14679 1199 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 CHMP1BQ7LBR1 199 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 PPM1NQ8N819 430 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 ELAC2Q9BQ52 826 aaKnown RBP10.63□□□□□ -0.71
COL11A1-201ENST00000353414 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 UNC45AQ9H3U1 944 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 NFU1Q9UMS0 254 aa10.63□□□□□ -0.71
COL11A1-201ENST00000353414 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
COL11A1-201ENST00000353414 SKAP2O75563 359 aaPredicted RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 TJP3O95049 919 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 C6orf222P0C671 652 aaPredicted RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SULT1E1P49888 294 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 AMHR2Q16671 573 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 MGAT5BQ3V5L5 792 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 CENPUQ71F23 418 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SELENONQ9NZV5 590 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 PALMO75781 387 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 FGGP02679 453 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 RARBP10826 455 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 DDX5P17844 614 aaKnown RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 MAP4P27816 1152 aaKnown RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 OR1G1P47890 313 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 VEPH1Q14D04 833 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 MAN2A1Q16706 1144 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 LRRC8EQ6NSJ5 796 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 MFN1Q8IWA4 741 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 TRIML1Q8N9V2 468 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 CCDC51Q96ER9 411 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 RUBCNLQ9H714 662 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 MTMR6Q9Y217 621 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 PGRMC1O00264 195 aaKnown RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 COPEO14579 308 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SOAT1P35610 550 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 MTMR2Q13614 643 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 E2F4Q16254 413 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 APOA5Q6Q788 366 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 PIK3R5Q8WYR1 880 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SPATS2LQ9NUQ6 558 aaKnown RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 RGL1Q9NZL6 768 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SEL1LQ9UBV2 794 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 ARHGAP26Q9UNA1 814 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SERPINI2O75830 405 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 BBOX1O75936 387 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 SERPING1P05155 500 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 DMC1Q14565 340 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 ZNF235Q14590 738 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 TAF11Q15544 211 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 IQANK1A0A1B0GTG1 560 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 POLRMTO00411 1230 aaKnown RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 HOXB7P09629 217 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 NFKBIAP25963 317 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 GNA15P30679 374 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 PLIN5Q00G26 463 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 FAM102AQ5T9C2 384 aaPredicted RBP10.62□□□□□ -0.71
COL11A1-201ENST00000353414 CCDC33Q8N5R6 958 aa10.62□□□□□ -0.71
COL11A1-201ENST00000353414 CNOT8Q9UFF9 292 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms