RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 NOX5Q96PH1 765 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 NLRC4Q9NPP4 1024 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 PANK4Q9NVE7 773 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 FAM169AQ9Y6X4 670 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 FRMD3A2A2Y4 597 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 RBAK-RBAKDNI3L0D1 243 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 ZNF862O60290 1169 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 NOL4O94818 638 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 ARIH2O95376 493 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 EYA4O95677 639 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 FAM153BP0C7A2 387 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 OSBPP22059 807 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 CARSP49589 748 aaKnown RBP9.37□□□□□ -0.91
TRIM55-204ENST00000353317 GTF2A2P52657 109 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 NAP1L1P55209 391 aaKnown RBP9.37□□□□□ -0.91
TRIM55-204ENST00000353317 FAM153CQ494X1 144 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 CFAP221Q4G0U5 840 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 TDRD12Q587J7 1177 aaKnown RBP9.37□□□□□ -0.91
TRIM55-204ENST00000353317 WDR78Q5VTH9 848 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 KCTD16Q68DU8 428 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 SEPT14Q6ZU15 432 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 SH2D3CQ8N5H7 860 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 RNF10Q8N5U6 811 aaKnown RBP9.37□□□□□ -0.91
TRIM55-204ENST00000353317 ERMNQ8TAM6 284 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 TUFT1Q9NNX1 390 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 FAM153AQ9UHL3 310 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
TRIM55-204ENST00000353317 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 HSF2BPO75031 334 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 STBD1O95210 358 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 FGFR1OPO95684 399 aaKnown RBP9.36□□□□□ -0.91
TRIM55-204ENST00000353317 DNA2P51530 1060 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 SKOR1P84550 965 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 APBA1Q02410 837 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 KCNA1Q09470 495 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 ICE2Q659A1 982 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 RASAL3Q86YV0 1011 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 DAW1Q8N136 415 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 DNERQ8NFT8 737 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 GPRASP2Q96D09 838 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 RUFY1Q96T51 708 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 GDF3Q9NR23 364 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 NFU1Q9UMS0 254 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 SAMM50Q9Y512 469 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 ZNF233A6NK53 670 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 PALMO75781 387 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 LIG3P49916 1009 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 NPEPPSP55786 919 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 PDCLQ13371 301 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 GLE1Q53GS7 698 aaKnown RBP9.36□□□□□ -0.91
TRIM55-204ENST00000353317 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 IPO4Q8TEX9 1081 aaKnown RBP9.36□□□□□ -0.91
TRIM55-204ENST00000353317 FIZ1Q96SL8 496 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 EPB41L5Q9HCM4 733 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
TRIM55-204ENST00000353317 TBC1D22BQ9NU19 505 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 PACSIN2Q9UNF0 486 aaPredicted RBP9.36□□□□□ -0.91
TRIM55-204ENST00000353317 PFASO15067 1338 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 ARID2Q68CP9 1835 aa9.36□□□□□ -0.91
TRIM55-204ENST00000353317 KIF3CO14782 793 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 HEXIM1O94992 359 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 FTCDO95954 541 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ZBTB48P10074 688 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ATP4AP20648 1035 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 KLRC1P26715 233 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ATP1A2P50993 1020 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 GUCY2DQ02846 1103 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 NNTQ13423 1086 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 TRADDQ15628 312 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 STXBP2Q15833 593 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 LY6KQ17RY6 165 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ZCWPW2Q504Y3 356 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 PLA2G4FQ68DD2 849 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 XRRA1Q6P2D8 792 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ANKRD23Q86SG2 305 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SFR1Q86XK3 245 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 KSR1Q8IVT5 923 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 CCDC60Q8IWA6 550 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 IFT20Q8IY31 132 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SCFD1Q8WVM8 642 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 IFT81Q8WYA0 676 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 KAT2BQ92831 832 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 EDEM3Q9BZQ6 932 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 FAM107BQ9H098 131 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 ZHX3Q9H4I2 956 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 PDGFCQ9NRA1 345 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 FBXO40Q9UH90 709 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 SLC25A27O95847 323 aa9.35□□□□□ -0.91
TRIM55-204ENST00000353317 P4HBP07237 508 aaKnown RBP9.35□□□□□ -0.91
TRIM55-204ENST00000353317 MYBP10242 640 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms