RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 C17orf80Q9BSJ5 609 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 RUSC1Q9BVN2 902 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 CSRNP2Q9H175 543 aa24.49■■□□□ 1.51
SNX3-202ENST00000349379 COL6A3P12111 3177 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 RFXAPO00287 272 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 LPXNO60711 386 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 POU3F3P20264 500 aaPredicted RBP24.48■■□□□ 1.51
SNX3-202ENST00000349379 SLC12A3P55017 1021 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 BTG3Q14201 252 aaPredicted RBP24.48■■□□□ 1.51
SNX3-202ENST00000349379 ZRSR1Q15695 479 aaKnown RBP24.48■■□□□ 1.51
SNX3-202ENST00000349379 LINC00301Q8NCQ3 95 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 KIFAP3Q92845 792 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 CDK5RAP3Q96JB5 506 aa24.48■■□□□ 1.51
SNX3-202ENST00000349379 ZNF396Q96N95 335 aaPredicted RBP24.48■■□□□ 1.51
SNX3-202ENST00000349379 TSPAN1O60635 241 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 ZNF623O75123 536 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 EOMESO95936 686 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 NAMPTP43490 491 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 MAPK7Q13164 816 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 DAW1Q8N136 415 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 CALML4Q96GE6 196 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 PLIN2Q99541 437 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 BLOC1S4Q9NUP1 217 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 PLXNA4Q9HCM2 1894 aa24.47■■□□□ 1.51
SNX3-202ENST00000349379 LRRIQ4A6NIV6 560 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 INO80B-WBP1J3KQ70 363 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 GUCY2CP25092 1073 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 AXLP30530 894 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 PPP2R5AQ15172 486 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 EPC2Q52LR7 807 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 FOXD4L5Q5VV16 416 aaPredicted RBP24.46■■□□□ 1.51
SNX3-202ENST00000349379 TWF2Q6IBS0 349 aaKnown RBP24.46■■□□□ 1.51
SNX3-202ENST00000349379 PPP4R3CPQ6ZMV5 832 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 USP49Q70CQ1 688 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 TMEM192Q8IY95 271 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 FOXD4L4Q8WXT5 416 aaPredicted RBP24.46■■□□□ 1.51
SNX3-202ENST00000349379 CLIC6Q96NY7 704 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 FAM105AQ9NUU6 356 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 MTUS1Q9ULD2 1270 aa24.46■■□□□ 1.51
SNX3-202ENST00000349379 MRPL42Q9Y6G3 142 aaKnown RBP24.46■■□□□ 1.51
SNX3-202ENST00000349379 C5orf67F2Z3F1 127 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 ERLIN2O94905 339 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 YEATS4O95619 227 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 PLA2G4BP0C869 781 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 FGFR1P11362 822 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 SKIP12755 728 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 PLCG1P19174 1290 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 RAB27AP51159 221 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 KARSQ15046 597 aaKnown RBP24.45■■□□□ 1.5
SNX3-202ENST00000349379 FAM187BQ17R55 369 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 UBXN11Q5T124 520 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 EPSTI1Q96J88 318 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 TIPINQ9BVW5 301 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 TMEM117Q9H0C3 514 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 C2orf40Q9H1Z8 148 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 FZD8Q9H461 694 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 KCND2Q9NZV8 630 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 ZDHHC9Q9Y397 364 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 RWDD3Q9Y3V2 267 aa24.45■■□□□ 1.5
SNX3-202ENST00000349379 HOXA2O43364 376 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 PPP6R2O75170 966 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 BRD1O95696 1058 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 IBSPP21815 317 aaPredicted RBP24.44■■□□□ 1.5
SNX3-202ENST00000349379 BECN1Q14457 450 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 STK38Q15208 465 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 PAN2Q504Q3 1202 aaKnown RBP24.44■■□□□ 1.5
SNX3-202ENST00000349379 SPECC1Q5M775 1068 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 KRI1Q8N9T8 703 aaKnown RBP24.44■■□□□ 1.5
SNX3-202ENST00000349379 FBXO22Q8NEZ5 403 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 GDPD5Q8WTR4 605 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 SYMPKQ92797 1274 aaKnown RBP24.44■■□□□ 1.5
SNX3-202ENST00000349379 CCDC51Q96ER9 411 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 PRIMPOLQ96LW4 560 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 CCDC113Q9H0I3 377 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 POLD4Q9HCU8 107 aa24.44■■□□□ 1.5
SNX3-202ENST00000349379 TFIP11Q9UBB9 837 aaKnown RBP24.44■■□□□ 1.5
SNX3-202ENST00000349379 TDRD15B5MCY1 1934 aaKnown RBP24.43■■□□□ 1.5
SNX3-202ENST00000349379 HIP1RO75146 1068 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 RB1P06400 928 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 ARF4P18085 180 aaPredicted RBP24.43■■□□□ 1.5
SNX3-202ENST00000349379 BMPR1AP36894 532 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 CLLU1OSQ5K130 101 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 ATL3Q6DD88 541 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 MRPL10Q7Z7H8 261 aaKnown RBP24.43■■□□□ 1.5
SNX3-202ENST00000349379 ZBTB8OSQ8IWT0 167 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 MAFAQ8NHW3 353 aaPredicted RBP24.43■■□□□ 1.5
SNX3-202ENST00000349379 IFT74Q96LB3 600 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 CASD1Q96PB1 797 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 C17orf75Q9HAS0 396 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 PRMT7Q9NVM4 692 aaPredicted RBP24.43■■□□□ 1.5
SNX3-202ENST00000349379 MTCH2Q9Y6C9 303 aa24.43■■□□□ 1.5
SNX3-202ENST00000349379 TBKBP1A7MCY6 615 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 H3BNC9 293 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 SPTLC2O15270 562 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 ARSHQ5FYA8 562 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 NOTUMQ6P988 496 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 RAD54LQ92698 747 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 DRC1Q96MC2 740 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 PLVAPQ9BX97 442 aa24.42■■□□□ 1.5
SNX3-202ENST00000349379 LMCD1Q9NZU5 365 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms