RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PPP2R2AP63151 447 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 CCT8L2Q96SF2 557 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 SAMSN1Q9NSI8 373 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 PLAAQ9Y263 795 aa11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 FNDC3AQ9Y2H6 1198 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 PRDM15P57071 1507 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-202ENST00000348513 VHLP40337 213 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 RPS6KA2Q15349 733 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 SKA1Q96BD8 255 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CHMP6Q96FZ7 201 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 AK8Q96MA6 479 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 GCNT4Q9P109 453 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 ECE2O60344 883 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 YWHAGP61981 247 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PDZD4Q76G19 769 aaPredicted RBP11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 LINC00301Q8NCQ3 95 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MAPK4P31152 587 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CXCR5P32302 372 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MDH1P40925 334 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 IRAK1P51617 712 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PIGOQ8TEQ8 1089 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MAGEF1Q9HAY2 307 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 KRT82Q9NSB4 513 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF180Q9UJW8 692 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MAP3K4Q9Y6R4 1608 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 STRNO43815 780 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 IGKV5-2P06315 115 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MYL3P08590 195 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CROCCP3Q8IVE0 287 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 OSBPL10Q9BXB5 764 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CUEDC2Q9H467 287 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 RAVER2Q9HCJ3 691 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 ATP8A1Q9Y2Q0 1164 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 RBM47A0AV96 593 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 POC1B-GALNT4F8VUJ3 575 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PEX14O75381 377 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PPP1R37O75864 691 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CPP00450 1065 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 PSAPP07602 524 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 MED21Q13503 144 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 TUBA3EQ6PEY2 450 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 CCNYQ8ND76 341 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 STKLD1Q8NE28 680 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 DSEQ9UL01 958 aa11.82□□□□□ -0.52
SMARCE1-202ENST00000348513 KCNQ2O43526 872 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 CYP2E1P05181 493 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 GSTA1P08263 222 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 RNF207Q6ZRF8 634 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 DHTKD1Q96HY7 919 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 KIFC3Q9BVG8 833 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 EPB41L5Q9HCM4 733 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 CDC42BPGQ6DT37 1551 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 GUCY1B2O75343 617 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 ESRRAP11474 423 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 H2AFXP16104 143 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 KIAA1841Q6NSI8 718 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 ETNK1Q9HBU6 452 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 CDK12Q9NYV4 1490 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 GYG2O15488 501 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 IFNAR1P17181 557 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 CCDC153Q494R4 210 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 PPP4R1Q8TF05 950 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 SEC16BQ96JE7 1060 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 SLC38A10Q9HBR0 1119 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 COL15A1P39059 1388 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 HEXIM1O94992 359 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 DDR1Q08345 913 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 AP1B1Q10567 949 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 MRPL28Q13084 256 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 SARM1Q6SZW1 724 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 EPC1Q9H2F5 836 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 PARVGQ9HBI0 331 aa11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 ZMYND8Q9ULU4 1186 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-202ENST00000348513 FTCDO95954 541 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 GUCY1A3Q02108 690 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 RGS9BPQ6ZS82 235 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 AGGF1Q8N302 714 aaeCLIP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 ST13P5Q8NFI4 369 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 RUBCNQ92622 972 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 PAGE5Q96GU1 130 aa11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 DMAP1Q9NPF5 467 aaPredicted RBP11.8□□□□□ -0.52
SMARCE1-202ENST00000348513 TLK1Q9UKI8 766 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms