RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 NLRP4Q96MN2 994 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 TBX20Q9UMR3 447 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 ZMYM2Q9UBW7 1377 aa29.79■■■□□ 2.36
SSBP4-202ENST00000348495 IKBKBO14920 756 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 CDK7P50613 346 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 GPC3P51654 580 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 PTENP60484 403 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 NCAPHQ15003 741 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 PTGISQ16647 500 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 TTI2Q6NXR4 508 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 FOXR2Q6PJQ5 311 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 ANKLE1Q8NAG6 615 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 RNF214Q8ND24 703 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 TMEM134Q9H6X4 195 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 IFT122Q9HBG6 1241 aa29.78■■■□□ 2.36
SSBP4-202ENST00000348495 STX17P56962 302 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 CDC42EP1Q00587 391 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 LUZP1Q86V48 1076 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 MAP4K3Q8IVH8 894 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 NME8Q8N427 588 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 AOPEPQ8N6M6 819 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 ADAMTS10Q9H324 1103 aa29.77■■■□□ 2.36
SSBP4-202ENST00000348495 TRMT13Q9NUP7 481 aaKnown RBP29.77■■■□□ 2.36
SSBP4-202ENST00000348495 TRIM49BA6NDI0 452 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 GPR32O75388 356 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 COL6A1P12109 1028 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 CAPN2P17655 700 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 EFNA5P52803 228 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 NLRP11P59045 1033 aaKnown RBP29.76■■■□□ 2.36
SSBP4-202ENST00000348495 MYL5Q02045 173 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 ANKRD40Q6AI12 368 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 RPAINQ86UA6 219 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 ZNF410Q86VK4 478 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 WNT8BQ93098 351 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 ACCSQ96QU6 501 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 CCDC113Q9H0I3 377 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 C2orf40Q9H1Z8 148 aa29.76■■■□□ 2.36
SSBP4-202ENST00000348495 FSD2A1L4K1 749 aa29.76■■■□□ 2.35
SSBP4-202ENST00000348495 TGFB1I1O43294 461 aa29.76■■■□□ 2.35
SSBP4-202ENST00000348495 GSE1Q14687 1217 aa29.76■■■□□ 2.35
SSBP4-202ENST00000348495 ZNF710Q8N1W2 664 aa29.76■■■□□ 2.35
SSBP4-202ENST00000348495 ZNF668Q96K58 619 aaPredicted RBP29.76■■■□□ 2.35
SSBP4-202ENST00000348495 TMEM206Q9H813 350 aa29.76■■■□□ 2.35
SSBP4-202ENST00000348495 PHLPP2Q6ZVD8 1323 aa29.75■■■□□ 2.35
SSBP4-202ENST00000348495 A0A087WZ62 844 aa29.75■■■□□ 2.35
SSBP4-202ENST00000348495 BICDL2A1A5D9 508 aa29.75■■■□□ 2.35
SSBP4-202ENST00000348495 FDXACB1Q9BRP7 624 aaPredicted RBP29.75■■■□□ 2.35
SSBP4-202ENST00000348495 IKZF4Q9H2S9 585 aa29.75■■■□□ 2.35
SSBP4-202ENST00000348495 K7ERI5 159 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 PDXKO00764 312 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 PHKA2P46019 1235 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 LRRC63Q05C16 580 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 PTK7Q13308 1070 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 SPATA1Q5VX52 437 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 ZBTB8OSQ8IWT0 167 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 PPP1R16BQ96T49 567 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 DUSP9Q99956 384 aaKnown RBP29.74■■■□□ 2.35
SSBP4-202ENST00000348495 TMEM106CQ9BVX2 250 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 TYW1Q9NV66 732 aaKnown RBP29.74■■■□□ 2.35
SSBP4-202ENST00000348495 TRAF3IP3Q9Y228 551 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 RPLP2P05387 115 aaKnown RBP29.74■■■□□ 2.35
SSBP4-202ENST00000348495 MBTD1Q05BQ5 628 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 TMEM62Q0P6H9 643 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 KIZQ2M2Z5 673 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 SENP6Q9GZR1 1112 aaPredicted RBP29.74■■■□□ 2.35
SSBP4-202ENST00000348495 TRPV6Q9H1D0 765 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 MINDY3Q9H8M7 445 aa29.74■■■□□ 2.35
SSBP4-202ENST00000348495 KIAA0100Q14667 2235 aaKnown RBP29.73■■■□□ 2.35
SSBP4-202ENST00000348495 DNAH12Q6ZR08 3092 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 SMTNL1A8MU46 457 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 B4GALT4O60513 344 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 PPP4R3CPQ6ZMV5 832 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 DIS3LQ8TF46 1054 aaKnown RBP29.73■■■□□ 2.35
SSBP4-202ENST00000348495 NLRP7Q8WX94 980 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 DHX38Q92620 1227 aaKnown RBP29.73■■■□□ 2.35
SSBP4-202ENST00000348495 GBP3Q9H0R5 595 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 HSD3B7Q9H2F3 369 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 FZD8Q9H461 694 aa29.73■■■□□ 2.35
SSBP4-202ENST00000348495 BECN2A8MW95 431 aa29.72■■■□□ 2.35
SSBP4-202ENST00000348495 CDHR5Q9HBB8 845 aa29.72■■■□□ 2.35
SSBP4-202ENST00000348495 EXOC7Q9UPT5 735 aa29.72■■■□□ 2.35
SSBP4-202ENST00000348495 NFE2L3Q9Y4A8 694 aa29.72■■■□□ 2.35
SSBP4-202ENST00000348495 TRIM71Q2Q1W2 868 aaKnown RBP29.71■■■□□ 2.35
SSBP4-202ENST00000348495 EDRF1Q3B7T1 1238 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 RSPH3Q86UC2 560 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 FAM126BQ8IXS8 530 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 SYCP3Q8IZU3 236 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 PIGRP01833 764 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 EDN1P05305 212 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 IQCF3P0C7M6 154 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 STRN3Q13033 797 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 SNX17Q15036 470 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 SRGAP1Q7Z6B7 1085 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 ZC3H3Q8IXZ2 948 aaKnown RBP29.71■■■□□ 2.35
SSBP4-202ENST00000348495 TSG101Q99816 390 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 NOD1Q9Y239 953 aa29.71■■■□□ 2.35
SSBP4-202ENST00000348495 MRPS6P82932 125 aaKnown RBP29.7■■■□□ 2.34
SSBP4-202ENST00000348495 NFIL3Q16649 462 aa29.7■■■□□ 2.34
SSBP4-202ENST00000348495 MAPK6Q16659 721 aa29.7■■■□□ 2.34
SSBP4-202ENST00000348495 C1orf53Q5VUE5 145 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms