RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 OR2W6PQ8NHA6 318 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.56■□□□□ 0.24
SRPK1-201ENST00000346162 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 USP15Q9Y4E8 981 aaPredicted RBP16.56■□□□□ 0.24
SRPK1-201ENST00000346162 AK9Q5TCS8 1911 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 TROAPQ12815 778 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 KAZNQ674X7 775 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 ADSSL1Q8N142 457 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 ADPGKQ9BRR6 497 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 LZTS1Q9Y250 596 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 SNX24Q9Y343 169 aa16.56■□□□□ 0.24
SRPK1-201ENST00000346162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
SRPK1-201ENST00000346162 PXDNQ92626 1479 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 STAM2O75886 525 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 ARL1P40616 181 aaPredicted RBP16.55■□□□□ 0.24
SRPK1-201ENST00000346162 ALCAMQ13740 583 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 TMEM60Q9H2L4 133 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 PALMDQ9NP74 551 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 NDE1Q9NXR1 346 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 ZFP69BQ9UJL9 534 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 WDR91A4D1P6 747 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 BFSP1Q12934 665 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 ZNF772Q68DY9 489 aaPredicted RBP16.55■□□□□ 0.24
SRPK1-201ENST00000346162 SPATA21Q7Z572 469 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 FLT1P17948 1338 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 APOEP02649 317 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 CASP7P55210 303 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 PEX3P56589 373 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 KNOP1Q1ED39 458 aaKnown RBP16.55■□□□□ 0.24
SRPK1-201ENST00000346162 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 SCYL2Q6P3W7 929 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 CASC4Q6P4E1 433 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 DDX47Q9H0S4 455 aaKnown RBP16.55■□□□□ 0.24
SRPK1-201ENST00000346162 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
SRPK1-201ENST00000346162 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
SRPK1-201ENST00000346162 CNTNAP5Q8WYK1 1306 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 A0A0G2JND7 137 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 GOLGA8IPA6NC78 632 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 GOLGA8JA6NMD2 632 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 UBE2Q2LH0YL09 131 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 CARSP49589 748 aaKnown RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 FXR1P51114 621 aaKnown RBP eCLIP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 GFPT1Q06210 699 aaPredicted RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 PDIA5Q14554 519 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 CIAPIN1Q6FI81 312 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 PALM2Q8IXS6 379 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 TRIM11Q96F44 468 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 DNAJC12Q9UKB3 198 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 CAPN11Q9UMQ6 739 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 TCP11X1B4DZS4 312 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 CHN1P15882 459 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 RXRBP28702 533 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 STAT3P40763 770 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 USP11P51784 963 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 BYSLQ13895 437 aaKnown RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 NR1I3Q14994 352 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 MTERF2Q49AM1 385 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 OPTNQ96CV9 577 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 PRMT1Q99873 361 aaKnown RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 NOD1Q9Y239 953 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 UBTFL6P0CB48 400 aaPredicted RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 STMN1P16949 149 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 PTPAQ15257 358 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 GRID2IPA4D2P6 1211 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 RASA1P20936 1047 aa16.54■□□□□ 0.24
SRPK1-201ENST00000346162 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
SRPK1-201ENST00000346162 INO80B-WBP1J3KQ70 363 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 TMCC1O94876 653 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 PRELPP51888 382 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 MIS18BP1Q6P0N0 1132 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 FAM81BQ96LP2 452 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 INO80BQ9C086 356 aaPredicted RBP16.53■□□□□ 0.24
SRPK1-201ENST00000346162 SATB2Q9UPW6 733 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 CCND2P30279 289 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 MMP14P50281 582 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 SGO2Q562F6 1265 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 NAALADL2Q58DX5 795 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 ATP2A3Q93084 1043 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 MOV10L1Q9BXT6 1211 aaKnown RBP16.53■□□□□ 0.24
SRPK1-201ENST00000346162 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 CPP00450 1065 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 BRAFP15056 766 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 NQO1P15559 274 aaKnown RBP16.53■□□□□ 0.24
SRPK1-201ENST00000346162 IGBP1P78318 339 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 ZNF543Q08ER8 600 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 KCTD2Q14681 263 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 RFX8Q6ZV50 586 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 AGGF1Q8N302 714 aaeCLIP16.53■□□□□ 0.24
SRPK1-201ENST00000346162 GMNNO75496 209 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 GSTA2P09210 222 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms