RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CHST13Q8NET6 341 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 OR8K1Q8NGG5 319 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 SMCR8Q8TEV9 937 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-202ENST00000345734 OPTNQ96CV9 577 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 DNAJC7Q99615 494 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 PAGR1Q9BTK6 254 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 ASCC2Q9H1I8 757 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-202ENST00000345734 PCDH10Q9P2E7 1040 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 TRAF3IP3Q9Y228 551 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
ATG4A-202ENST00000345734 WDR64B1ANS9 1081 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 H3BRB1 525 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 PDXKO00764 312 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CXCL11O14625 94 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 BACH1O14867 736 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CETN3O15182 167 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CLIC2O15247 247 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CNMDO75829 334 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 YWHABP31946 246 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 JAK3P52333 1124 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 KRT76Q01546 638 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 MOGSQ13724 837 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 WDR59Q6PJI9 974 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CYP26C1Q6V0L0 522 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 RIOX2Q8IUF8 465 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 TMTC1Q8IUR5 882 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 TRIM59Q8IWR1 403 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 FAM178BQ8IXR5 827 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 ACRBPQ8NEB7 543 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 NUP58Q9BVL2 599 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 SPATC1LQ9H0A9 340 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 TUT1Q9H6E5 874 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 FAM207AQ9NSI2 230 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 TYW1Q9NV66 732 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 KCND2Q9NZV8 630 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 TCEAL9Q9UHQ7 104 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 DBR1Q9UK59 544 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 ODF2LQ9ULJ1 636 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 KIF2AO00139 706 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 FANCGO15287 622 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 TGFB1I1O43294 461 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CALUO43852 315 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 USO1O60763 962 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 LYPLA2O95372 231 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 GNA14O95837 355 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 MYCP01106 439 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 NR3C1P04150 777 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 CCDC175P0C221 793 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 MARSP56192 900 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 HERVK_113P62684 666 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 SP4Q02446 784 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 PPIL2Q13356 520 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 ODR4Q5SWX8 454 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 PLA2G4FQ68DD2 849 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF720Q7Z2F6 126 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 NCAPG2Q86XI2 1143 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 MOV10L1Q9BXT6 1211 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 MMRN2Q9H8L6 949 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 KCNH4Q9UQ05 1017 aa10.13□□□□□ -0.79
ATG4A-202ENST00000345734 ZNFX1Q9P2E3 1918 aaKnown RBP10.13□□□□□ -0.79
ATG4A-202ENST00000345734 EIF3DO15371 548 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 SFNP31947 248 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 CASP4P49662 377 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 NPEPPSP55786 919 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 PSMC5P62195 406 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 ETF1P62495 437 aaKnown RBP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 SP2Q02086 613 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF746Q6NUN9 644 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 C4orf19Q8IY42 314 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 TXNRD2Q9NNW7 524 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 SEL1LQ9UBV2 794 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 AGTPBP1Q9UPW5 1226 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 PCDHA10Q9Y5I2 948 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 ARID2Q68CP9 1835 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 MCM3APO60318 1980 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 SPATA31C2B4DYI2 1134 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 MAFGO15525 162 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 AKAP3O75969 853 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 ZBED6P86452 979 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 NAA30Q147X3 362 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 FIGNQ5HY92 759 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 ARMC9Q7Z3E5 817 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 CNPY4Q8N129 248 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 IWS1Q96ST2 819 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 SENP7Q9BQF6 1050 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 TSPYL1Q9H0U9 437 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 JPH1Q9HDC5 661 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-202ENST00000345734 LZTFL1Q9NQ48 299 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 GPRC5CQ9NQ84 441 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 GABBR1Q9UBS5 961 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 DNAI1Q9UI46 699 aa10.12□□□□□ -0.79
ATG4A-202ENST00000345734 A0A1W2PQJ5 194 aa10.11□□□□□ -0.79
ATG4A-202ENST00000345734 ZNF862O60290 1169 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms