RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 POLR2DO15514 142 aaKnown RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 DARSP14868 501 aaKnown RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 SFPQP23246 707 aaKnown RBP eCLIP15.3■□□□□ 0.04
TPM4-202ENST00000344824 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 BTG3Q14201 252 aaPredicted RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 PDIA5Q14554 519 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 NPAS4Q8IUM7 802 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 EXOC8Q8IYI6 725 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 FMR1NBQ8N0W7 255 aaPredicted RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 FIBCD1Q8N539 461 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 RNF169Q8NCN4 708 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 TCP11Q8WWU5 503 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 DHX58Q96C10 678 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 HSD17B14Q9BPX1 270 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 DHX33Q9H6R0 707 aaKnown RBP15.3■□□□□ 0.04
TPM4-202ENST00000344824 TUFT1Q9NNX1 390 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 HPSEQ9Y251 543 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 PPME1Q9Y570 386 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 KINO60870 393 aaKnown RBP15.29■□□□□ 0.04
TPM4-202ENST00000344824 ZNF202O95125 648 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 CSPG5O95196 566 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 CTNNB1P35222 781 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 SARSP49591 514 aaKnown RBP15.29■□□□□ 0.04
TPM4-202ENST00000344824 GATMP50440 423 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 SNW1Q13573 536 aaKnown RBP15.29■□□□□ 0.04
TPM4-202ENST00000344824 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 ZNF410Q86VK4 478 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 CATSPER3Q86XQ3 398 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 ENGASEQ8NFI3 743 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 SP7Q8TDD2 431 aaPredicted RBP15.29■□□□□ 0.04
TPM4-202ENST00000344824 CDK5RAP3Q96JB5 506 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 MMTAG2Q9BU76 263 aaKnown RBP15.29■□□□□ 0.04
TPM4-202ENST00000344824 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
TPM4-202ENST00000344824 PCDHB7Q9Y5E2 793 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 PRUNE2Q8WUY3 3088 aa15.29■□□□□ 0.04
TPM4-202ENST00000344824 PLXNA4Q9HCM2 1894 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 LYPLA2O95372 231 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 RARRES1P49788 294 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 ERVK-21P61565 698 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 GRB10Q13322 594 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 SKIV2LQ15477 1246 aaKnown RBP15.28■□□□□ 0.04
TPM4-202ENST00000344824 CAMK4Q16566 473 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
TPM4-202ENST00000344824 CATSPER4Q7RTX7 472 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 ZNF710Q8N1W2 664 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
TPM4-202ENST00000344824 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 CCSER1Q9C0I3 900 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 C1orf112Q9NSG2 853 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 TMEM63CQ9P1W3 806 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
TPM4-202ENST00000344824 PIN4Q9Y237 131 aaKnown RBP15.28■□□□□ 0.04
TPM4-202ENST00000344824 MYO7AQ13402 2215 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.04
TPM4-202ENST00000344824 DGAT1O75907 488 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 SPATA31C1P0DKV0 1188 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 PLCG1P19174 1290 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 STAT6P42226 847 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 CDC42EP1Q00587 391 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 LAMTOR4Q0VGL1 99 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 SLC24A5Q71RS6 500 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 RNF149Q8NC42 400 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 NACC1Q96RE7 527 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 POLR3CQ9BUI4 534 aaPredicted RBP15.27■□□□□ 0.04
TPM4-202ENST00000344824 INO80BQ9C086 356 aaPredicted RBP15.27■□□□□ 0.04
TPM4-202ENST00000344824 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
TPM4-202ENST00000344824 RGS18Q9NS28 235 aa15.27■□□□□ 0.04
TPM4-202ENST00000344824 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
TPM4-202ENST00000344824 TBKBP1A7MCY6 615 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 DGKIO75912 1065 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 RPA1P27694 616 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 ECM1Q16610 540 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 EPC2Q52LR7 807 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 CCDC183Q5T5S1 534 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 TWF2Q6IBS0 349 aaKnown RBP15.26■□□□□ 0.03
TPM4-202ENST00000344824 TMEM192Q8IY95 271 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 CNNM3Q8NE01 707 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
TPM4-202ENST00000344824 PNMA5Q96PV4 448 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 NUP62CLQ9H1M0 184 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
TPM4-202ENST00000344824 UNC80Q8N2C7 3258 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 REV3LO60673 3130 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 C9IYK1 514 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 ERLIN2O94905 339 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 FGFR1P11362 822 aa15.26■□□□□ 0.03
TPM4-202ENST00000344824 PHKA2P46019 1235 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms