RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 THAP2Q9H0W7 228 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 HSPBP1Q9NZL4 362 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 PRPF4BQ13523 1007 aaKnown RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 KCTD16Q68DU8 428 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 TTC19Q6DKK2 380 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 HAUS6Q7Z4H7 955 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 ADAT2Q7Z6V5 191 aaKnown RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 RABEP2Q9H5N1 569 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 CHORDC1Q9UHD1 332 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 SORBS3O60504 671 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 ERVK-9P63128 1117 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 SP4Q02446 784 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 XKR9Q5GH70 373 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 LRRC31Q6UY01 552 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 SLC9A9Q8IVB4 645 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 LPAR1Q92633 364 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 KAT5Q92993 513 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 DEFB129Q9H1M3 183 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 TMEM59LQ9UK28 342 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 PPP1R9AQ9ULJ8 1098 aa16.15■□□□□ 0.18
VIPAS39-202ENST00000343765 A0A0A6YYK5 440 aaPredicted RBP16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 CCDC169A6NNP5 214 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 CCNE2O96020 404 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 TTMPQ5BVD1 217 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 INTS8Q75QN2 995 aaKnown RBP16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SAMD7Q7Z3H4 446 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 LMO3Q8TAP4 145 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 ACTRT1Q8TDG2 376 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 JDP2Q8WYK2 163 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 RFFLQ8WZ73 363 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 ELMO3Q96BJ8 720 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 AMFRQ9UKV5 643 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SOX10P56693 466 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 CFAP58Q5T655 872 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 RNF207Q6ZRF8 634 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SLFN11Q7Z7L1 901 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 XXYLT1Q8NBI6 393 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SAAL1Q96ER3 474 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 CWC15Q9P013 229 aaKnown RBP16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 INTUQ9ULD6 942 aa16.14■□□□□ 0.17
VIPAS39-202ENST00000343765 CES2O00748 559 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 SART1O43290 800 aaKnown RBP16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 OPA1O60313 960 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 PRAMEF18Q5VWM3 479 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 NIPA1Q7RTP0 329 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 SCFD2Q8WU76 684 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 CCDC127Q96BQ5 260 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 ATG4CQ96DT6 458 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 SYT11Q9BT88 431 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 ACP6Q9NPH0 428 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 AMACRQ9UHK6 382 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 TMEM253P0C7T8 217 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 CCDC172P0C7W6 258 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 ZBTB48P10074 688 aaPredicted RBP16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 CETN1Q12798 172 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 ALS2CLQ60I27 953 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 SH3GL2Q99962 352 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 PDCD2LQ9BRP1 358 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 TBC1D22BQ9NU19 505 aa16.13■□□□□ 0.17
VIPAS39-202ENST00000343765 TMEM110-MUSTN1A8MSY1 372 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 GOLGA8KD6RF30 607 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 MAP2K1Q02750 393 aaPredicted RBP16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 ZNF211Q13398 564 aaPredicted RBP16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 NNTQ13423 1086 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 C1orf220Q5T0J3 134 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 CBWD2Q8IUF1 395 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 NCANO14594 1321 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 ZBED4O75132 1171 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 FGGP02679 453 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 ADRB2P07550 413 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 COPB2P35606 906 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 MXI1P50539 228 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 PPFIA1Q13136 1202 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 HES6Q96HZ4 224 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 CELF4Q9BZC1 486 aaKnown RBP16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 TAF1DQ9H5J8 278 aaPredicted RBP16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 COG5Q9UP83 839 aa16.12■□□□□ 0.17
VIPAS39-202ENST00000343765 WDR64B1ANS9 1081 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 PSMC5P62195 406 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 KIF22Q14807 665 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms