RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MICU2Q8IYU8 434 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ZNF579Q8NAF0 562 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 ANKRD36BP1Q96IX9 119 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 DCLRE1BQ9H816 532 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SLC40A1Q9NP59 571 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 DNM3Q9UQ16 869 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CCDC182A6NF36 153 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CCT8L1PA6NM43 557 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RAD51BO15315 384 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ZPR1O75312 459 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ARIH2O95376 493 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 USF2Q15853 346 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 MCUQ8NE86 351 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NMD3Q96D46 503 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 KCNK16Q96T55 309 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NHEJ1Q9H9Q4 299 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 PNMA2Q9UL42 364 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ATF3P18847 181 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 GRM1Q13255 1194 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CFAP70Q5T0N1 1121 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SMG5Q9UPR3 1016 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 MYO1FO00160 1098 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NPR2P20594 1047 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RGS2P41220 211 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 PHKA1P46020 1223 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 PLOD1Q02809 727 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 C16orf72Q14CZ0 275 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SUGP1Q8IWZ8 645 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 SNX19Q92543 992 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 VPS39Q96JC1 886 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ZNF692Q9BU19 519 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 MAP3K2Q9Y2U5 619 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CADP27708 2225 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SNTNA6NMZ2 147 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 AP1G2O75843 785 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 MED26O95402 600 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ALBP02768 609 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 EPHB1P54762 984 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ARL4CP56559 192 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RSBN1Q5VWQ0 802 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 SEC16BQ96JE7 1060 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CUEDC2Q9H467 287 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CACNA2D2Q9NY47 1150 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RSL24D1Q9UHA3 163 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 RTEL1-TNFRSF6BF6WH68 1400 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NDUFA10O95299 355 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 OATP04181 439 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ABCE1P61221 599 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 KDSRQ06136 332 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ARMCX5Q6P1M9 558 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 AKAP14Q86UN6 197 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 MED12LQ86YW9 2145 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 MYCT1Q8N699 235 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 MLXQ9UH92 298 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SAP30BPQ9UHR5 308 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 IQSEC3Q9UPP2 1182 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 FIS1Q9Y3D6 152 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 YLPM1P49750 1951 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 TYW5A2RUC4 315 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 ARHGEF35A5YM69 484 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 UQCRFS1P1P0C7P4 283 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RALBP11234 206 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 TRIP10Q15642 601 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NEK10Q6ZWH5 1172 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 DNAAF3Q8N9W5 541 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 TCEANC2Q96MN5 208 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RBM42Q9BTD8 480 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 C6orf62Q9GZU0 229 aaPredicted RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 SERHL2Q9H4I8 314 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NPHS2Q9NP85 383 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 NLRC4Q9NPP4 1024 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 SERHLQ9NQF3 203 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 HACD3Q9P035 362 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ATXN2Q99700 1313 aaKnown RBP6.53□□□□□ -1.36
VCAN-203ENST00000343200 FGGP02679 453 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 LDHCP07864 332 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ITGAXP20702 1163 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CHMLP26374 656 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CASP5P51878 434 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 BTN3A2P78410 334 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 ZNF174Q15697 407 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CCDC153Q494R4 210 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RNF217Q8TC41 542 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CAPSLQ8WWF8 208 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 TTC17Q96AE7 1141 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 PLIN2Q99541 437 aa6.53□□□□□ -1.36
VCAN-203ENST00000343200 RPRD2Q5VT52 1461 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.52□□□□□ -1.37
VCAN-203ENST00000343200 B3GNT6Q6ZMB0 384 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 LPCAT2Q7L5N7 544 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 GIMAP8Q8ND71 665 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 TMEM87BQ96K49 555 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 OSBPL8Q9BZF1 889 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 DAPK2Q9UIK4 370 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SCAF11Q99590 1463 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms