RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 GRM1Q13255 1194 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 SNRNP48Q6IEG0 339 aaKnown RBP7.71□□□□□ -1.18
VCAN-202ENST00000342785 SWSAP1Q6NVH7 229 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 SLC35G2Q8TBE7 412 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 CCHCR1Q8TD31 782 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 RUBCNQ92622 972 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 RAB3IPQ96QF0 476 aaPredicted RBP7.71□□□□□ -1.18
VCAN-202ENST00000342785 ATP6V0A4Q9HBG4 840 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 SAYSD1Q9NPB0 183 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 ODF2LQ9ULJ1 636 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 MCF2LO15068 1137 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 LDHAP00338 332 aaKnown RBP7.71□□□□□ -1.18
VCAN-202ENST00000342785 GUCY2CP25092 1073 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 SUPT20HL1Q3ZLR7 823 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 OR2W6PQ8NHA6 318 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 C1orf54Q8WWF1 131 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 ZIM3Q96PE6 472 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 MKNK1Q9BUB5 465 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 PCDHA10Q9Y5I2 948 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 LRRIQ3A6PVS8 624 aaPredicted RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 H3BQF6 201 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CDK17Q00537 523 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 PDE1BQ01064 536 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 KIAA1755Q5JYT7 1200 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 OR6B2Q6IFH4 312 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 DUSP9Q99956 384 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 RIOX1Q9H6W3 641 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 ANKZF1Q9H8Y5 726 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 ZHX2Q9Y6X8 837 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CAPN9O14815 690 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 TLR3O15455 904 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 CYTH3O43739 400 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 BRAFP15056 766 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CFAP61Q8NHU2 1237 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CALR3Q96L12 384 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 BCL9O00512 1426 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 DHX34Q14147 1143 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 SCYL3Q8IZE3 742 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 PYROXD1Q8WU10 500 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 PITPNM3Q9BZ71 974 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 TTC7AQ9ULT0 858 aaPredicted RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 ALG6Q9Y672 507 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 ARHGAP42A6NI28 874 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 EIF3HO15372 352 aaKnown RBP eCLIP7.7□□□□□ -1.18
VCAN-202ENST00000342785 MED24O75448 989 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CHRNA5P30532 468 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 MDH1P40925 334 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 BYSLQ13895 437 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 EZH2Q15910 746 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 ICE2Q659A1 982 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 LMBRD2Q68DH5 695 aaPredicted RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CENPUQ71F23 418 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 C7orf31Q8N865 590 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CHMP6Q96FZ7 201 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 CCT8L2Q96SF2 557 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 POLLQ9UGP5 575 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 NOD1Q9Y239 953 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 RASA4BC9J798 803 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 RASA4O43374 803 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 SEC24CP53992 1094 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 SESN3P58005 492 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 GEN1Q17RS7 908 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 ZNF667Q5HYK9 610 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 MORC4Q8TE76 937 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 RBM41Q96IZ5 413 aaKnown RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 NLRP4Q96MN2 994 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 WNT8AQ9H1J5 351 aa7.7□□□□□ -1.18
VCAN-202ENST00000342785 ZNF277Q9NRM2 450 aaPredicted RBP7.7□□□□□ -1.18
VCAN-202ENST00000342785 SYNJ2BP-COX16A0A087WUM0 186 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 WDR91A4D1P6 747 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MSH4O15457 936 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RPSAP08865 295 aaKnown RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 TMEM253P0C7T8 217 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 PRLRP16471 622 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 TRIM68Q6AZZ1 485 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 CCDC125Q86Z20 511 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 KIAA0895Q8NCT3 520 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 EFCC1Q9HA90 598 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 NGRNQ9NPE2 291 aaKnown RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 HSPBP1Q9NZL4 362 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 COX16Q9P0S2 106 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 A6NJR5 290 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 CHUKO15111 745 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MUM1L1Q5H9M0 696 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 RINT1Q6NUQ1 792 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 GJB7Q6PEY0 223 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 DARS2Q6PI48 645 aaKnown RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 SESTD1Q86VW0 696 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 NME8Q8N427 588 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 SYT2Q8N9I0 419 aaPredicted RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 THOC1Q96FV9 657 aaKnown RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 KCND1Q9NSA2 647 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MEFVO15553 781 aaPredicted RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 SCP2P22307 547 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 MUM1Q2TAK8 710 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 GBP7Q8N8V2 638 aaPredicted RBP7.69□□□□□ -1.18
VCAN-202ENST00000342785 NUDT12Q9BQG2 462 aa7.69□□□□□ -1.18
VCAN-202ENST00000342785 VCPKMTQ9H867 229 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms