RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 GOLGA8IPA6NC78 632 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 GOLGA8JA6NMD2 632 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 B4GALT5O43286 388 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 NR3C1P04150 777 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 ADSSP30520 456 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 ADAM9Q13443 819 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 IER5Q5VY09 327 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 DNAJB3Q8WWF6 145 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 VTI1AQ96AJ9 217 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 FAM84AQ96KN4 292 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 NTPCRQ9BSD7 190 aaKnown RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 SIP14410 1827 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 AKAP3O75969 853 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 NAMPTP43490 491 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 ADAM17P78536 824 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 LRRC63Q05C16 580 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 ARHGEF6Q15052 776 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 CEP135Q66GS9 1140 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 CCDC155Q8N6L0 562 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 SPIRE2Q8WWL2 714 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 MTG1Q9BT17 334 aaPredicted RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 HAPLN2Q9GZV7 340 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 GBP3Q9H0R5 595 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 IFT122Q9HBG6 1241 aa15.25■□□□□ 0.03
PMS1-201ENST00000342075 TYW1Q9NV66 732 aaKnown RBP15.25■□□□□ 0.03
PMS1-201ENST00000342075 NRCAMQ92823 1304 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 CYP2C9P11712 490 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 SEZ6Q53EL9 994 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 TRAF3IP3Q9Y228 551 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 ACLYP53396 1101 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 UBASH3AP57075 661 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 RTP1P59025 263 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 NLRP11P59045 1033 aaKnown RBP15.24■□□□□ 0.03
PMS1-201ENST00000342075 CT47A1Q5JQC4 288 aaPredicted RBP15.24■□□□□ 0.03
PMS1-201ENST00000342075 RETREG2Q8NC44 543 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 TSG101Q99816 390 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 TARS2Q9BW92 718 aaKnown RBP15.24■□□□□ 0.03
PMS1-201ENST00000342075 RNF208Q9H0X6 261 aa15.24■□□□□ 0.03
PMS1-201ENST00000342075 PES1O00541 588 aaKnown RBP15.23■□□□□ 0.03
PMS1-201ENST00000342075 PDXKO00764 312 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 HNRNPDLO14979 420 aaKnown RBP15.23■□□□□ 0.03
PMS1-201ENST00000342075 TPM4P67936 248 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 MAP4K3Q8IVH8 894 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 BICD1Q96G01 975 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 ACCSQ96QU6 501 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 TRMT13Q9NUP7 481 aaKnown RBP15.23■□□□□ 0.03
PMS1-201ENST00000342075 COL1A2P08123 1366 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 INO80B-WBP1J3KQ70 363 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
PMS1-201ENST00000342075 FKBP3Q00688 224 aaKnown RBP15.23■□□□□ 0.03
PMS1-201ENST00000342075 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 OSBPL7Q9BZF2 842 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 INO80BQ9C086 356 aaPredicted RBP15.23■□□□□ 0.03
PMS1-201ENST00000342075 C17orf75Q9HAS0 396 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 ANKFY1Q9P2R3 1169 aa15.23■□□□□ 0.03
PMS1-201ENST00000342075 MBLAC1A4D2B0 266 aaPredicted RBP15.22■□□□□ 0.03
PMS1-201ENST00000342075 K7ERI5 159 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 CCL5P13501 91 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 PRMT2P55345 433 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 SARM1Q6SZW1 724 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 RNF180Q86T96 592 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 TCP11Q8WWU5 503 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 OSMRQ99650 979 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 ST6GALNAC4Q9H4F1 302 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 THAP9Q9H5L6 903 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 PRKCSHP14314 528 aaPredicted RBP15.22■□□□□ 0.03
PMS1-201ENST00000342075 GOLGA8FQ08AF8 430 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 GOLGA8DPQ0D2H9 430 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 GTF2IRD1Q9UHL9 959 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 MAGEB2O15479 319 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 CTSHP09668 335 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 PPP1R2P41236 205 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 DNM2P50570 870 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 GPC3P51654 580 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 MXD4Q14582 209 aaPredicted RBP15.22■□□□□ 0.03
PMS1-201ENST00000342075 KATNAL1Q9BW62 490 aa15.22■□□□□ 0.03
PMS1-201ENST00000342075 CALUO43852 315 aaPredicted RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 MSCO60682 206 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 MTIF2P46199 727 aaKnown RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 KLK7P49862 253 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 COPB1P53618 953 aaKnown RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 NKX3-2P78367 333 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 MIIPQ5JXC2 388 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 CDCA2Q69YH5 1023 aaPredicted RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 STXBP4Q6ZWJ1 553 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 CPB2Q96IY4 423 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 TUBGCP2Q9BSJ2 902 aa15.21■□□□□ 0.03
PMS1-201ENST00000342075 GTPBP4Q9BZE4 634 aaKnown RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 PAK6Q9NQU5 681 aaPredicted RBP15.21■□□□□ 0.03
PMS1-201ENST00000342075 A0A1W2PQ45 241 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms