RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
TPM3-208ENST00000341485 MYH11P35749 1972 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 GRID2IPA4D2P6 1211 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 BTNL10A8MVZ5 291 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 MAFGO15525 162 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
TPM3-208ENST00000341485 PRKCIP41743 596 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 CNTN2Q02246 1040 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 GNPTABQ3T906 1256 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 MEI1Q5TIA1 1274 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 GJB7Q6PEY0 223 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 ZNF720Q7Z2F6 126 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
TPM3-208ENST00000341485 SEL1LQ9UBV2 794 aa16.36■□□□□ 0.21
TPM3-208ENST00000341485 UBE4BO95155 1302 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 GTPBP10A4D1E9 387 aaKnown RBP16.35■□□□□ 0.21
TPM3-208ENST00000341485 PDHXO00330 501 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 CYP2C8P10632 490 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
TPM3-208ENST00000341485 SLC7A5Q01650 507 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 STXBP2Q15833 593 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 HSP90B2PQ58FF3 399 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 C10orf76Q5T2E6 689 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 CDHR1Q96JP9 859 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 INPP4AQ96PE3 977 aaPredicted RBP16.35■□□□□ 0.21
TPM3-208ENST00000341485 LXNQ9BS40 222 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 MED4Q9NPJ6 270 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 NENFQ9UMX5 172 aa16.35■□□□□ 0.21
TPM3-208ENST00000341485 ATP9AO75110 1047 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 SYF2O95926 243 aaKnown RBP16.34■□□□□ 0.21
TPM3-208ENST00000341485 ALDH5A1P51649 535 aaPredicted RBP16.34■□□□□ 0.21
TPM3-208ENST00000341485 Q3C1V9 767 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 CFAP221Q4G0U5 840 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 DNAAF5Q86Y56 855 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 RNF14Q9UBS8 474 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 NAGPAQ9UK23 515 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 ODF2LQ9ULJ1 636 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 PACSIN2Q9UNF0 486 aaPredicted RBP16.34■□□□□ 0.21
TPM3-208ENST00000341485 SLC45A1Q9Y2W3 748 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 LCTP09848 1927 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 LOXHD1Q8IVV2 1947 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 CCDC66A2RUB6 948 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
TPM3-208ENST00000341485 ZBTB48P10074 688 aaPredicted RBP16.34■□□□□ 0.21
TPM3-208ENST00000341485 DNA2P51530 1060 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 ERVK-9P63128 1117 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 KRT76Q01546 638 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 SPRYD7Q5W111 196 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 MMP19Q99542 508 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 MKNK1Q9BUB5 465 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 AGPAT3Q9NRZ7 376 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 DMAC2Q9NW81 257 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 KCND2Q9NZV8 630 aa16.34■□□□□ 0.21
TPM3-208ENST00000341485 PHACTR2O75167 634 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 GUCY2CP25092 1073 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 LMAN1P49257 510 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 JAK3P52333 1124 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 MAPK7Q13164 816 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 KCTD2Q14681 263 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 ODR4Q5SWX8 454 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 ANKRD23Q86SG2 305 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 DAW1Q8N136 415 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 BRI3BPQ8WY22 251 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.21
TPM3-208ENST00000341485 MROH8Q9H579 483 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 STIM2Q9P246 746 aa16.33■□□□□ 0.21
TPM3-208ENST00000341485 ARHGEF35A5YM69 484 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 WDR64B1ANS9 1081 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 HIP1RO75146 1068 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 ANXA13P27216 316 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 SFNP31947 248 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 FMO5P49326 533 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 CYP2J2P51589 502 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 HUNKP57058 714 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 CST9Q5W186 159 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 ALKBH5Q6P6C2 394 aaKnown RBP16.33■□□□□ 0.2
TPM3-208ENST00000341485 STRA6Q9BX79 667 aa16.33■□□□□ 0.2
TPM3-208ENST00000341485 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
TPM3-208ENST00000341485 RNF40O75150 1001 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 RGS20O76081 388 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
TPM3-208ENST00000341485 C8orf74Q6P047 294 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 STXBP4Q6ZWJ1 553 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 KIAA1217Q5T5P2 1943 aa16.32■□□□□ 0.2
TPM3-208ENST00000341485 SOWAHBA6NEL2 793 aa16.31■□□□□ 0.2
TPM3-208ENST00000341485 AGPSO00116 658 aa16.31■□□□□ 0.2
TPM3-208ENST00000341485 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.2
TPM3-208ENST00000341485 PPP1R37O75864 691 aa16.31■□□□□ 0.2
TPM3-208ENST00000341485 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
TPM3-208ENST00000341485 QARSP47897 775 aaKnown RBP16.31■□□□□ 0.2
TPM3-208ENST00000341485 CCNA1P78396 465 aa16.31■□□□□ 0.2
TPM3-208ENST00000341485 ZNF746Q6NUN9 644 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms