RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SPATA31C1P0DKV0 1188 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 RARRES1P49788 294 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 RAB27AP51159 221 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 TFDP1Q14186 410 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 PDE12Q6L8Q7 609 aaKnown RBP22.44■■□□□ 1.18
SYNE2-201ENST00000341472 RBM23Q86U06 439 aaKnown RBP22.44■■□□□ 1.18
SYNE2-201ENST00000341472 CATSPER3Q86XQ3 398 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 ERMNQ8TAM6 284 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 RSPH1Q8WYR4 309 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 MRPS27Q92552 414 aaKnown RBP22.44■■□□□ 1.18
SYNE2-201ENST00000341472 PGBD4Q96DM1 585 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 NACC1Q96RE7 527 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 MRPL9Q9BYD2 267 aaKnown RBP22.44■■□□□ 1.18
SYNE2-201ENST00000341472 TLR9Q9NR96 1032 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 AGPAT5Q9NUQ2 364 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 SPG21Q9NZD8 308 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 LZTS1Q9Y250 596 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 KIF3AQ9Y496 699 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 PCDHB2Q9Y5E7 798 aa22.44■■□□□ 1.18
SYNE2-201ENST00000341472 IL9P15248 144 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 HOXA11P31270 313 aaPredicted RBP22.43■■□□□ 1.18
SYNE2-201ENST00000341472 PPM1AP35813 382 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 ARL2P36404 184 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 NRIP1P48552 1158 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 PTENP60484 403 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 ERVFC1P60507 584 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 POU5F1BQ06416 359 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 DLX2Q07687 328 aaPredicted RBP22.43■■□□□ 1.18
SYNE2-201ENST00000341472 NCBP1Q09161 790 aaKnown RBP22.43■■□□□ 1.18
SYNE2-201ENST00000341472 LONRF3Q496Y0 759 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 GLB1LQ6UWU2 654 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 ADGRD2Q7Z7M1 963 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 FAM178BQ8IXR5 827 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 EFHBQ8N7U6 833 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 LPPQ93052 612 aa22.43■■□□□ 1.18
SYNE2-201ENST00000341472 POLR3CQ9BUI4 534 aaPredicted RBP22.43■■□□□ 1.18
SYNE2-201ENST00000341472 LINC01565O15544 149 aa22.42■■□□□ 1.18
SYNE2-201ENST00000341472 U2AF2P26368 475 aaKnown RBP eCLIP22.42■■□□□ 1.18
SYNE2-201ENST00000341472 ALDH7A1P49419 539 aaKnown RBP22.42■■□□□ 1.18
SYNE2-201ENST00000341472 PCBP1Q15365 356 aaKnown RBP eCLIP22.42■■□□□ 1.18
SYNE2-201ENST00000341472 PCDHGC5Q9Y5F6 944 aa22.42■■□□□ 1.18
SYNE2-201ENST00000341472 MED24O75448 989 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 OFD1O75665 1012 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 PBX3P40426 434 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 NDUFV1P49821 464 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 CLUL1Q15846 466 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 NOMO2Q5JPE7 1267 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 MRPL10Q7Z7H8 261 aaKnown RBP22.41■■□□□ 1.18
SYNE2-201ENST00000341472 GJD3Q8N144 294 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 C4orf32Q8N8J7 132 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 ASAP3Q8TDY4 903 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 TMX3Q96JJ7 454 aa22.41■■□□□ 1.18
SYNE2-201ENST00000341472 NGRNQ9NPE2 291 aaKnown RBP22.41■■□□□ 1.18
SYNE2-201ENST00000341472 DBR1Q9UK59 544 aaKnown RBP22.41■■□□□ 1.18
SYNE2-201ENST00000341472 INO80B-WBP1J3KQ70 363 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 FSCN2O14926 492 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 PER2O15055 1255 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 ERLIN2O94905 339 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 GLRA2P23416 452 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 RPA1P27694 616 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 MCM2P49736 904 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 BCAR1P56945 870 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 IFNLR1Q8IU57 520 aaPredicted RBP22.4■■□□□ 1.18
SYNE2-201ENST00000341472 SLC39A11Q8N1S5 342 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 INPP5FQ9Y2H2 1132 aa22.4■■□□□ 1.18
SYNE2-201ENST00000341472 MEIS3P2A8K0S8 358 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 USO1O60763 962 aaKnown RBP22.39■■□□□ 1.17
SYNE2-201ENST00000341472 AXLP30530 894 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 TOB1P50616 345 aaPredicted RBP22.39■■□□□ 1.17
SYNE2-201ENST00000341472 RNASELQ05823 741 aaKnown RBP22.39■■□□□ 1.17
SYNE2-201ENST00000341472 NBR1Q14596 966 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 UBXN11Q5T124 520 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 MAEAQ7L5Y9 396 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 TMC7Q7Z402 723 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 CNNM3Q8NE01 707 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 CDCA3Q99618 268 aaPredicted RBP22.39■■□□□ 1.17
SYNE2-201ENST00000341472 TCF25Q9BQ70 676 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 POLR3FQ9H1D9 316 aaPredicted RBP22.39■■□□□ 1.17
SYNE2-201ENST00000341472 CD320Q9NPF0 282 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 CD207Q9UJ71 328 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 LOXHD1Q8IVV2 1947 aa22.39■■□□□ 1.17
SYNE2-201ENST00000341472 TCF20Q9UGU0 1960 aaKnown RBP22.38■■□□□ 1.17
SYNE2-201ENST00000341472 CARNS1A5YM72 827 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 TBX10O75333 385 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 SSTR3P32745 418 aaPredicted RBP22.38■■□□□ 1.17
SYNE2-201ENST00000341472 FXR2P51116 673 aaKnown RBP eCLIP22.38■■□□□ 1.17
SYNE2-201ENST00000341472 PTGDRQ13258 359 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 CAPSQ13938 189 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 PDIA5Q14554 519 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 PLPP4Q5VZY2 271 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 MCTP1Q6DN14 999 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 AGMOQ6ZNB7 445 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 MCPH1Q8NEM0 835 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 URGCPQ8TCY9 931 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 CCDC51Q96ER9 411 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 ENTPD7Q9NQZ7 604 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 TBC1D13Q9NVG8 400 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 CLEC1BQ9P126 229 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 LRWD1Q9UFC0 647 aa22.38■■□□□ 1.17
SYNE2-201ENST00000341472 MUC3AQ02505 3323 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms