RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 AGXT2Q9BYV1 514 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 SART1O43290 800 aaKnown RBP20.7■□□□□ 0.9
CDK13-202ENST00000340829 SH3BP5O60239 455 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 UCHL3P15374 230 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 FBXL13Q8NEE6 735 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 GNA15P30679 374 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 SSTR3P32745 418 aaPredicted RBP20.7■□□□□ 0.9
CDK13-202ENST00000340829 SIX6OS1Q8N1H7 587 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 KLHL29Q96CT2 875 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 RBM41Q96IZ5 413 aaKnown RBP20.7■□□□□ 0.9
CDK13-202ENST00000340829 AMACRQ9UHK6 382 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 TFR2Q9UP52 801 aa20.7■□□□□ 0.9
CDK13-202ENST00000340829 RPS6KA2Q15349 733 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 SEC23AQ15436 765 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 NUGGCQ68CJ6 796 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 RAPH1Q70E73 1250 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 NBPF3Q9H094 633 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 TTC7AQ9ULT0 858 aaPredicted RBP20.69■□□□□ 0.9
CDK13-202ENST00000340829 TBX3O15119 743 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 CYP26A1O43174 497 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 SLC37A4O43826 429 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 ENTPD3O75355 529 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 MAGOHP61326 146 aaKnown RBP20.69■□□□□ 0.9
CDK13-202ENST00000340829 PRPSAP1Q14558 356 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 ZC2HC1CQ53FD0 456 aaPredicted RBP20.69■□□□□ 0.9
CDK13-202ENST00000340829 GPD1LQ8N335 351 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 SCAF8Q9UPN6 1271 aaKnown RBP20.69■□□□□ 0.9
CDK13-202ENST00000340829 MMEP08473 750 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 NYAP1Q6ZVC0 841 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 AGPAT1Q99943 283 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 RBAKQ9NYW8 714 aaPredicted RBP20.69■□□□□ 0.9
CDK13-202ENST00000340829 SLC16A3O15427 465 aaKnown RBP20.69■□□□□ 0.9
CDK13-202ENST00000340829 SLC9A1P19634 815 aa20.69■□□□□ 0.9
CDK13-202ENST00000340829 FXR2P51116 673 aaKnown RBP eCLIP20.69■□□□□ 0.91e-7■□□□□ 11.2
CDK13-202ENST00000340829 SSU72P8A0A1W2PR75 194 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 RFX1P22670 979 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 SLC8A1P32418 973 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 MAP2K2P36507 400 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 FHOD1Q9Y613 1164 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 NOL3O60936 208 aaKnown RBP20.68■□□□□ 0.9
CDK13-202ENST00000340829 SMARCAL1Q9NZC9 954 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 MICAL1Q8TDZ2 1067 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 ELAC2Q9BQ52 826 aaKnown RBP20.68■□□□□ 0.9
CDK13-202ENST00000340829 SLC9A2Q9UBY0 812 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 AGO2Q9UKV8 859 aaKnown RBP20.68■□□□□ 0.9
CDK13-202ENST00000340829 TCRBV5S4A2TA0A5A2 114 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 OATP04181 439 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 PMS2P54278 862 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 HSPBP1Q9NZL4 362 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 ZNF70Q9UC06 446 aaPredicted RBP20.68■□□□□ 0.9
CDK13-202ENST00000340829 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
CDK13-202ENST00000340829 SMARCA1P28370 1054 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 GPC3P51654 580 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 PHLDB3Q6NSJ2 640 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 SCYL3Q8IZE3 742 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.67■□□□□ 0.9
CDK13-202ENST00000340829 TACC3Q9Y6A5 838 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 ESYT2A0FGR8 921 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 TARSL2A2RTX5 802 aaKnown RBP20.67■□□□□ 0.9
CDK13-202ENST00000340829 CALB1P05937 261 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 NWD1Q149M9 1564 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 RNPC3Q96LT9 517 aaKnown RBP20.67■□□□□ 0.9
CDK13-202ENST00000340829 UBE4BO95155 1302 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 GOLGA8MH3BSY2 632 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 GSTA1P08263 222 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 GSTA2P09210 222 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 CHRNA3P32297 505 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 FMO5P49326 533 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 KIF22Q14807 665 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 CCDC137Q6PK04 289 aaKnown RBP20.67■□□□□ 0.9
CDK13-202ENST00000340829 METTL23Q86XA0 190 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 OTUD5Q96G74 571 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 BAATQ14032 418 aaPredicted RBP20.67■□□□□ 0.9
CDK13-202ENST00000340829 E2F5Q15329 346 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 DAGLBQ8NCG7 672 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 VCXQ9H320 206 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 PCSK1NQ9UHG2 260 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 PNMA3Q9UL41 463 aa20.67■□□□□ 0.9
CDK13-202ENST00000340829 TBXAS1P24557 533 aaPredicted RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 EDRF1Q3B7T1 1238 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 THOC1Q96FV9 657 aaKnown RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 JPH1Q9HDC5 661 aaPredicted RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 PHKA2P46019 1235 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 GALCP54803 685 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 HDLBPQ00341 1268 aaKnown RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 APOBEC3FQ8IUX4 373 aaKnown RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 TRIM59Q8IWR1 403 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 C1orf54Q8WWF1 131 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 ANKRD7Q92527 254 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 APEX2Q9UBZ4 518 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 AK9Q5TCS8 1911 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 ZSCAN20P17040 1043 aaPredicted RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 VCPKMTQ9H867 229 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 NFX1Q12986 1120 aaKnown RBP20.66■□□□□ 0.9
CDK13-202ENST00000340829 STK33Q9BYT3 514 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 SLITRK6Q9H5Y7 841 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 FBXL5Q9UKA1 691 aa20.66■□□□□ 0.9
CDK13-202ENST00000340829 FAF2Q96CS3 445 aa20.65■□□□□ 0.9
CDK13-202ENST00000340829 MLXIPLQ9NP71 852 aa20.65■□□□□ 0.9
CDK13-202ENST00000340829 EVI5O60447 810 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms