RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 IRGQQ8WZA9 623 aa18.21■□□□□ 0.51
CDK11B-201ENST00000340677 PRCCQ92733 491 aaPredicted RBP18.21■□□□□ 0.51
CDK11B-201ENST00000340677 RTFDC1Q9BY42 306 aaPredicted RBP18.21■□□□□ 0.51
CDK11B-201ENST00000340677 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
CDK11B-201ENST00000340677 SATB2Q9UPW6 733 aa18.21■□□□□ 0.51
CDK11B-201ENST00000340677 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 ACSL4O60488 711 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 RXRGP48443 463 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 TUBA3CQ13748 450 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 DPYSQ14117 519 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 TXNRD3Q86VQ6 643 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 RETREG2Q8NC44 543 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 SLAIN1Q8ND83 568 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 TBC1D16Q8TBP0 767 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 DPF3Q92784 378 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 ARL8AQ96BM9 186 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 GIMAP5Q96F15 307 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 PDP2Q9P2J9 529 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 E7EWF7 191 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 TMED10P49755 219 aaKnown RBP18.2■□□□□ 0.5
CDK11B-201ENST00000340677 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
CDK11B-201ENST00000340677 FAM129AQ9BZQ8 928 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 MTMR12Q9C0I1 747 aa18.2■□□□□ 0.5
CDK11B-201ENST00000340677 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
CDK11B-201ENST00000340677 C10orf71Q711Q0 1435 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 ARPC4-TTLL3A0A0A6YYG9 625 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 GOLGA8IPA6NC78 632 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 ASMTLO95671 621 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 EPB41P11171 864 aaKnown RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CYP7A1P22680 504 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 GALK1P51570 392 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 IFI16Q16666 785 aaKnown RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 EAPPQ56P03 285 aaPredicted RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 KDM7AQ6ZMT4 941 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 STOX1Q6ZVD7 989 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 APPL2Q8NEU8 664 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 STARD8Q92502 1023 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 HEPHQ9BQS7 1158 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 SELENOOQ9BVL4 669 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 ABCG4Q9H172 646 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 FAIMQ9NVQ4 179 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 HMGXB4Q9UGU5 601 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CTAGE15A4D2H0 777 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CFAP73A6NFT4 308 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 SRRM3A6NNA2 597 aaPredicted RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 TFRCP02786 760 aaKnown RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CTAGE8P0CG41 777 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 DSTNP60981 165 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 COG2Q14746 738 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CYTH1Q15438 398 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 RFPL4BQ6ZWI9 263 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CTAGE6Q86UF2 777 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 CTAGE4Q8IX94 777 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 RBM46Q8TBY0 533 aaKnown RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 KCTD5Q9NXV2 234 aa18.19■□□□□ 0.5
CDK11B-201ENST00000340677 GPC6Q9Y625 555 aaPredicted RBP18.19■□□□□ 0.5
CDK11B-201ENST00000340677 RASA4BC9J798 803 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 ATP5DP30049 168 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 KRT85P78386 507 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 PDE4DQ08499 809 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 CTC1Q2NKJ3 1217 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 DAB2IPQ5VWQ8 1189 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 UCMAQ8WVF2 138 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 NSUN4Q96CB9 384 aaKnown RBP18.18■□□□□ 0.5
CDK11B-201ENST00000340677 CCDC177Q9NQR7 707 aaPredicted RBP18.18■□□□□ 0.5
CDK11B-201ENST00000340677 LAMB1P07942 1786 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 SLX4Q8IY92 1834 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 CCDC169A6NNP5 214 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 H0YIN7 160 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 ZNF213O14771 459 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 MTMR3Q13615 1198 aa18.18■□□□□ 0.5
CDK11B-201ENST00000340677 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 FAM47E-STBD1D6RA91 191 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 DDHD2O94830 711 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 CHRNB1P11230 501 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 ETS2P15036 469 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 POLR2EP19388 210 aaKnown RBP18.17■□□□□ 0.5
CDK11B-201ENST00000340677 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
CDK11B-201ENST00000340677 RALGDSQ12967 914 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
CDK11B-201ENST00000340677 MYLK3Q32MK0 819 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 SH2D3CQ8N5H7 860 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 SEC16BQ96JE7 1060 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 PCDHGB3Q9Y5G1 929 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 MAGEB6P1A0A0J9YX57 407 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 PSMD14O00487 310 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 FBP2O00757 339 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 HAT1O14929 419 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 CYP1A1P04798 512 aaPredicted RBP18.17■□□□□ 0.5
CDK11B-201ENST00000340677 C2CD5Q86YS7 1000 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 IFNL3Q8IZI9 196 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 SDCCAG3Q96C92 435 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 RIOK1Q9BRS2 568 aaKnown RBP18.17■□□□□ 0.5
CDK11B-201ENST00000340677 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
CDK11B-201ENST00000340677 FAM205AQ6ZU69 1335 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms