RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CEP89Q96ST8 783 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 INTS9Q9NV88 658 aaKnown RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 CLRN2A0PK11 232 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 AP3B2Q13367 1082 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 ARHGAP27Q6ZUM4 889 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 SUGP1Q8IWZ8 645 aaKnown RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 C1orf54Q8WWF1 131 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 THOC1Q96FV9 657 aaKnown RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 ZNF577Q9BSK1 485 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 GLT8D2Q9H1C3 349 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 AGPAT3Q9NRZ7 376 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 PI4KBQ9UBF8 816 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 TBK1Q9UHD2 729 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 FSBPO95073 299 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 JAM2P57087 298 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 ZKSCAN8Q15776 578 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 EPM2AIP1Q7L775 607 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 ARHGEF19Q8IW93 802 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 FAM20AQ96MK3 541 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 XPO6Q96QU8 1125 aaKnown RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 WDR18Q9BV38 432 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 APEX2Q9UBZ4 518 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 RASAL2Q9UJF2 1139 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 STXBP5LQ9Y2K9 1186 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 ARP10275 920 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 COMTP21964 271 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 TBC1D1Q86TI0 1168 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 GDAP1Q8TB36 358 aa15.54■□□□□ 0.08
CPSF7-201ENST00000340437 RNF25Q96BH1 459 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-201ENST00000340437 DDX3YO15523 660 aaKnown RBP15.53■□□□□ 0.08
CPSF7-201ENST00000340437 NOVP48745 357 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-201ENST00000340437 LONRF1Q17RB8 773 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 SEL1L2Q5TEA6 688 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 CCDC137Q6PK04 289 aaKnown RBP15.53■□□□□ 0.08
CPSF7-201ENST00000340437 HOOK3Q86VS8 718 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 SIAH1Q8IUQ4 282 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 LRRC34Q8IZ02 419 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 CHMP6Q96FZ7 201 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 AGPAT1Q99943 283 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 MTFR1LQ9H019 292 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 PRR12Q9ULL5 1215 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 CYP26A1O43174 497 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 HIP1RO75146 1068 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 SGPL1O95470 568 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 CPXCR1Q8N123 301 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 UBL4BQ8N7F7 174 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 ACER1Q8TDN7 264 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 CBWD1Q9BRT8 395 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 ADAM33Q9BZ11 813 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 TMEM253P0C7T8 217 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 DLATP10515 647 aaKnown RBP15.53■□□□□ 0.08
CPSF7-201ENST00000340437 RPL21P46778 160 aaKnown RBP15.53■□□□□ 0.08
CPSF7-201ENST00000340437 DCAF4Q8WV16 495 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 CSRNP1Q96S65 589 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 ASIC3Q9UHC3 531 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 VAV3Q9UKW4 847 aa15.53■□□□□ 0.08
CPSF7-201ENST00000340437 A0A1W2PRG0 241 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 SREBF1P36956 1147 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 SCTRP47872 440 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 C15orf52Q6ZUT6 534 aaKnown RBP15.52■□□□□ 0.08
CPSF7-201ENST00000340437 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 ZNF720Q7Z2F6 126 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 CCDC197Q8NCU1 140 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 ATP8B4Q8TF62 1192 aa15.52■□□□□ 0.08
CPSF7-201ENST00000340437 ANKRD63C9JTQ0 380 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 CCDC172P0C7W6 258 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 DAB2IPQ5VWQ8 1189 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 SEPT12Q8IYM1 358 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 SAAL1Q96ER3 474 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 NAP1L3Q99457 506 aaPredicted RBP15.52■□□□□ 0.07
CPSF7-201ENST00000340437 LXNQ9BS40 222 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 MTRF1LQ9UGC7 380 aaKnown RBP15.52■□□□□ 0.07
CPSF7-201ENST00000340437 CYP3A7-CYP3A51PA0A087WV96 503 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 SLC16A3O15427 465 aaKnown RBP15.52■□□□□ 0.07
CPSF7-201ENST00000340437 FOSP01100 380 aaPredicted RBP15.52■□□□□ 0.07
CPSF7-201ENST00000340437 PYGMP11217 842 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 BCRP11274 1271 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 CYP3A7P24462 503 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 PTENP60484 403 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 ANKRD20A8PQ5CZ79 823 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 MIGA2Q7L4E1 593 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 RASGEF1CQ8N431 466 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 PWWP2AQ96N64 755 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 MYCBPQ99417 103 aaPredicted RBP15.52■□□□□ 0.07
CPSF7-201ENST00000340437 FBXO28Q9NVF7 368 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 SAMD15Q9P1V8 674 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 TCEAL9Q9UHQ7 104 aa15.52■□□□□ 0.07
CPSF7-201ENST00000340437 ANKRD62A6NC57 917 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 BTNL10A8MVZ5 291 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 KRT5P13647 590 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 GAP43P17677 238 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 CETN1Q12798 172 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 BFSP1Q12934 665 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 TNIP1Q15025 636 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 SNCBQ16143 134 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 CRY2Q49AN0 593 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms