RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 NPHP3-ACAD11A0A0J9YXS1 232 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 DENND3A2RUS2 1198 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 GRXCR1A8MXD5 290 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 INO80B-WBP1J3KQ70 363 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 CMA1P23946 247 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 PCBP1Q15365 356 aaKnown RBP eCLIP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 TMCO2Q7Z6W1 182 aaPredicted RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 RTN4RL1Q86UN2 441 aaPredicted RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 ZBTB8OSQ8IWT0 167 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 IQUBQ8NA54 791 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 DHX58Q96C10 678 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 ADAM2Q99965 735 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 C2orf40Q9H1Z8 148 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 CUEDC2Q9H467 287 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 PIN4Q9Y237 131 aaKnown RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 TDRD15B5MCY1 1934 aaKnown RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 A0A1W2PQ27 194 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 A0A1W2PQ64 194 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 A0A1W2PQD8 194 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 ENPP3O14638 875 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 TSPAN1O60635 241 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 ERLIN2O94905 339 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 GJB5O95377 273 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 PFKFB1P16118 471 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 NPTX2P47972 431 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 ZNF131P52739 623 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 PEX3P56589 373 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 AMHR2Q16671 573 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 SV2BQ7L1I2 683 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 DEPTORQ8TB45 409 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 PYM1Q9BRP8 204 aaKnown RBP14.2□□□□□ -0.14
SRSF3-201ENST00000339436 PBX4Q9BYU1 374 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 CCDC113Q9H0I3 377 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 TNMDQ9H2S6 317 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 C1orf112Q9NSG2 853 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 KCNH3Q9ULD8 1083 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 EYSQ5T1H1 3165 aa14.2□□□□□ -0.14
SRSF3-201ENST00000339436 COL4A4P53420 1690 aaPredicted RBP14.19□□□□□ -0.14
SRSF3-201ENST00000339436 PHLPP2Q6ZVD8 1323 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 FAM237AA0A1B0GTK4 181 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 C9IYK1 514 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 TBCAO75347 108 aaKnown RBP14.19□□□□□ -0.14
SRSF3-201ENST00000339436 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
SRSF3-201ENST00000339436 PLS3P13797 630 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 DNAJB2P25686 324 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 SARSP49591 514 aaKnown RBP14.19□□□□□ -0.14
SRSF3-201ENST00000339436 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
SRSF3-201ENST00000339436 RABGGTBP53611 331 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 GIT2Q14161 759 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 SLC24A5Q71RS6 500 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 TOP1MTQ969P6 601 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 MAGEF1Q9HAY2 307 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 CHST12Q9NRB3 414 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 KBTBD4Q9NVX7 518 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 DACT1Q9NYF0 836 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 ARHGAP28Q9P2N2 729 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 HPSEQ9Y251 543 aa14.19□□□□□ -0.14
SRSF3-201ENST00000339436 CNTNAP2Q9UHC6 1331 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 A0A1B0GVL5 298 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 MYMKA6NI61 221 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 CCDC169A6NNP5 214 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 SFI1A8K8P3 1242 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 FAM13AO94988 1023 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 ZSCAN20P17040 1043 aaPredicted RBP14.18□□□□□ -0.14
SRSF3-201ENST00000339436 HOXA11P31270 313 aaPredicted RBP14.18□□□□□ -0.14
SRSF3-201ENST00000339436 PBX2P40425 430 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 EFNA5P52803 228 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 RAB30Q15771 203 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 MAPK6Q16659 721 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 FAM187BQ17R55 369 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 NPAS4Q8IUM7 802 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 CRIPAKQ8N1N5 446 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
SRSF3-201ENST00000339436 DDX12PQ92771 950 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 TRAIPQ9BWF2 469 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 FZD8Q9H461 694 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 PARVGQ9HBI0 331 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 KMT5AQ9NQR1 393 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 PRMT7Q9NVM4 692 aaPredicted RBP14.18□□□□□ -0.14
SRSF3-201ENST00000339436 LARSQ9P2J5 1176 aaKnown RBP14.18□□□□□ -0.14
SRSF3-201ENST00000339436 YBX2Q9Y2T7 364 aaKnown RBP14.18□□□□□ -0.14
SRSF3-201ENST00000339436 PCDHA11Q9Y5I1 949 aa14.18□□□□□ -0.14
SRSF3-201ENST00000339436 PDCD11Q14690 1871 aaKnown RBP14.17□□□□□ -0.14
SRSF3-201ENST00000339436 B4GALT5O43286 388 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 TLL1O43897 1013 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 PRKCBP05771 671 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 ARF4P18085 180 aaPredicted RBP14.17□□□□□ -0.14
SRSF3-201ENST00000339436 KCNA4P22459 653 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 HTRA4P83105 476 aaPredicted RBP14.17□□□□□ -0.14
SRSF3-201ENST00000339436 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
SRSF3-201ENST00000339436 FAM117BQ6P1L5 589 aa14.17□□□□□ -0.14
SRSF3-201ENST00000339436 DYMQ7RTS9 669 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms