RNA–Protein interactions for RNA: ENST00000338487.5

DUPD1-201, Transcript of dual specificity phosphatase and pro isomerase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUPD1, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUPD1-201ENST00000338487 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
DUPD1-201ENST00000338487 PCDHB12Q9Y5F1 795 aa17.82■□□□□ 0.44
DUPD1-201ENST00000338487 NT5C1B-RDH14C9J2C7 533 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 DGAT1O75907 488 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 FGF18O76093 207 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 CDC25AP30304 524 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 CCT6AP40227 531 aaKnown RBP17.81■□□□□ 0.44
DUPD1-201ENST00000338487 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 ERVFC1P60507 584 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 CLUL1Q15846 466 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 AAK1Q2M2I8 961 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 UBXN11Q5T124 520 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 SRGAP1Q7Z6B7 1085 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
DUPD1-201ENST00000338487 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.81■□□□□ 0.44
DUPD1-201ENST00000338487 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
DUPD1-201ENST00000338487 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 PCDHB2Q9Y5E7 798 aa17.81■□□□□ 0.44
DUPD1-201ENST00000338487 H3BQV1 296 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 INO80B-WBP1J3KQ70 363 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 EOMESO95936 686 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 IL9P15248 144 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 LTBRP36941 435 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 AFF1P51825 1210 aaKnown RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 PTENP60484 403 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 RBM10P98175 930 aaKnown RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 PADI6Q6TGC4 694 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 CDR2LQ86X02 465 aaPredicted RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 EXOC8Q8IYI6 725 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 LRRC43Q8N309 656 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 BSNDQ8WZ55 320 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 EIF2AQ9BY44 585 aaKnown RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
DUPD1-201ENST00000338487 LRWD1Q9UFC0 647 aa17.8■□□□□ 0.44
DUPD1-201ENST00000338487 PER2O15055 1255 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 ASAP2O43150 1006 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 B4GALT5O43286 388 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 HOXA2O43364 376 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
DUPD1-201ENST00000338487 B4GALT3O60512 393 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 TSPAN1O60635 241 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 LAG3P18627 525 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 RPA1P27694 616 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
DUPD1-201ENST00000338487 MBTD1Q05BQ5 628 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 NAALADL2Q58DX5 795 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 KCNT2Q6UVM3 1135 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 ERMNQ8TAM6 284 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 MICAL1Q8TDZ2 1067 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 PABPC5Q96DU9 382 aaKnown RBP17.79■□□□□ 0.44
DUPD1-201ENST00000338487 NACC1Q96RE7 527 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 AAASQ9NRG9 546 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 KIAA1024Q9UPX6 916 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 USP20Q9Y2K6 914 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 TTC28Q96AY4 2481 aa17.79■□□□□ 0.44
DUPD1-201ENST00000338487 TNFRSF10AO00220 468 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 TBX10O75333 385 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 OFD1O75665 1012 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 XRCC6P12956 609 aaKnown RBP eCLIP17.78■□□□□ 0.44
DUPD1-201ENST00000338487 NRIP1P48552 1158 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 MCM2P49736 904 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
DUPD1-201ENST00000338487 LEXMQ3ZCV2 418 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 LARP1BQ659C4 914 aaKnown RBP17.78■□□□□ 0.44
DUPD1-201ENST00000338487 AGMOQ6ZNB7 445 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
DUPD1-201ENST00000338487 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
DUPD1-201ENST00000338487 GBP3Q9H0R5 595 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
DUPD1-201ENST00000338487 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 HES2Q9Y543 173 aa17.78■□□□□ 0.44
DUPD1-201ENST00000338487 MUC3AQ02505 3323 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 ARHGEF35A5YM69 484 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 LRRIQ4A6NIV6 560 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 TTLL13PA6NNM8 815 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 E9PMD0 336 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 ERLIN2O94905 339 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 TFDP1Q14186 410 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 COL19A1Q14993 1142 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 ZRSR1Q15695 479 aaKnown RBP17.77■□□□□ 0.44
DUPD1-201ENST00000338487 AMHR2Q16671 573 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 PLPP4Q5VZY2 271 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.44
DUPD1-201ENST00000338487 ZNF280BQ86YH2 543 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 IGSF22Q8N9C0 903 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 SMG8Q8ND04 991 aaKnown RBP17.77■□□□□ 0.44
DUPD1-201ENST00000338487 SNX29Q8TEQ0 813 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 ZNF558Q96NG5 402 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 TRAIPQ9BWF2 469 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 APOL6Q9BWW8 343 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 BHMT2Q9H2M3 363 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 CD320Q9NPF0 282 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 TLR9Q9NR96 1032 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 DDX19AQ9NUU7 478 aaKnown RBP17.77■□□□□ 0.44
DUPD1-201ENST00000338487 TBC1D13Q9NVG8 400 aa17.77■□□□□ 0.44
DUPD1-201ENST00000338487 DNAJB4Q9UDY4 337 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms