RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 EHD2Q9NZN4 543 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 HNRNPCL2B2RXH8 293 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 H0Y626 953 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 TRIM16O95361 564 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 KCNB1Q14721 858 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 KYAT1Q16773 422 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 LRRC24Q50LG9 513 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 NAF1Q96HR8 494 aaKnown RBP8.54□□□□□ -1.04
TNPO1-201ENST00000337273 TIPINQ9BVW5 301 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 RPF1Q9H9Y2 349 aaKnown RBP8.54□□□□□ -1.04
TNPO1-201ENST00000337273 LAMC1P11047 1609 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 A0A0G2JND7 137 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 PIK3R2O00459 728 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 KIAA0391O15091 583 aaKnown RBP8.54□□□□□ -1.04
TNPO1-201ENST00000337273 PPIP5K2O43314 1243 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 PAX7P23759 505 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 UBXN2AP68543 259 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 LRRC14Q15048 493 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 ASPSCR1Q9BZE9 553 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 ZHX2Q9Y6X8 837 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 SIX6OS1Q8N1H7 587 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 TTC8Q8TAM2 541 aa8.54□□□□□ -1.04
TNPO1-201ENST00000337273 EFTUD2Q15029 972 aaKnown RBP eCLIP8.53□□□□□ -1.043e-7■■■■■ 28.2
TNPO1-201ENST00000337273 ZBTB41Q5SVQ8 909 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 GUF1Q8N442 669 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ARL10Q8N8L6 244 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 SAYSD1Q9NPB0 183 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 KLHL11Q9NVR0 708 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 BLOC1S6Q9UL45 172 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 K7ERI5 159 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 BBOX1O75936 387 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 GYG1P46976 350 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 LRRC36Q1X8D7 754 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 HABP4Q5JVS0 413 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 RSRC2Q7L4I2 434 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 AGGF1Q8N302 714 aaeCLIP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 TTC17Q96AE7 1141 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PI4KBQ9UBF8 816 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PPARGC1AQ9UBK2 798 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 MEIS1O00470 390 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 TRMT10CQ7L0Y3 403 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 FOXP4Q8IVH2 680 aaPredicted RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 RHOT1Q8IXI2 618 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 SEPT8Q92599 483 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 TBC1D22BQ9NU19 505 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ADGRG1Q9Y653 693 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 CCND1P24385 295 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 KCTD2Q14681 263 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 EXT2Q93063 718 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 INO80BQ9C086 356 aaPredicted RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 WARS2Q9UGM6 360 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PMLP29590 882 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 SOX5P35711 763 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 AGBL2Q5U5Z8 902 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 FRA10AC1Q70Z53 315 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 SRLQ86TD4 932 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 FMR1NBQ8N0W7 255 aaPredicted RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 FAM149B1Q96BN6 582 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 FAM167AQ96KS9 214 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 GPR101Q96P66 508 aaPredicted RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 STX18Q9P2W9 335 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ANAPC7Q9UJX3 599 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 COPG1Q9Y678 874 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PSMA2P25787 234 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 KLC1Q07866 573 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ABI1Q8IZP0 508 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PI4K2BQ8TCG2 481 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 FAM118BQ9BPY3 351 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 SAMD9Q5K651 1589 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 E2F6O75461 281 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PPP1R37O75864 691 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 RPS6P62753 249 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 MDH1P40925 334 aaKnown RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 YWHAHQ04917 246 aaPredicted RBP8.53□□□□□ -1.04
TNPO1-201ENST00000337273 CLIC2O15247 247 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 IL10P22301 178 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 ITPRIPL1Q6GPH6 555 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 EFHBQ8N7U6 833 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 RFFLQ8WZ73 363 aa8.53□□□□□ -1.04
TNPO1-201ENST00000337273 HSPA13P48723 471 aa8.52□□□□□ -1.04
TNPO1-201ENST00000337273 MRPS35P82673 323 aaKnown RBP8.52□□□□□ -1.04
TNPO1-201ENST00000337273 DAB2IPQ5VWQ8 1189 aa8.52□□□□□ -1.04
TNPO1-201ENST00000337273 OR6B2Q6IFH4 312 aa8.52□□□□□ -1.04
TNPO1-201ENST00000337273 MS4A14Q96JA4 679 aa8.52□□□□□ -1.04
TNPO1-201ENST00000337273 ROPN1BQ9BZX4 212 aaPredicted RBP8.52□□□□□ -1.04
TNPO1-201ENST00000337273 ROPN1Q9HAT0 212 aaPredicted RBP8.52□□□□□ -1.04
TNPO1-201ENST00000337273 E7ENQ6 273 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 H3BRJ5 948 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 SNX2O60749 519 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 OSBPP22059 807 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 SFNP31947 248 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 ARHGEF6Q15052 776 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 MTHFD1LQ6UB35 978 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 TRIM59Q8IWR1 403 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 STX19Q8N4C7 294 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 XXYLT1Q8NBI6 393 aa8.52□□□□□ -1.05
TNPO1-201ENST00000337273 PBXIP1Q96AQ6 731 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms