RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 AZI2Q9H6S1 392 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 RAB21Q9UL25 225 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 RPA1P27694 616 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 POLGP54098 1239 aaPredicted RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 TFAMQ00059 246 aaKnown RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 ARSHQ5FYA8 562 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 SCYL2Q6P3W7 929 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 TRIM59Q8IWR1 403 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 PROM2Q8N271 834 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 IFT74Q96LB3 600 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 GLT8D2Q9H1C3 349 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 RNF19AQ9NV58 838 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 GABBR1Q9UBS5 961 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 CNOT8Q9UFF9 292 aaKnown RBP8.87□□□□□ -0.99
HPS4-201ENST00000336873 NR2E1Q9Y466 385 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 PCDHB4Q9Y5E5 795 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 ALG6Q9Y672 507 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 AKAP11Q9UKA4 1901 aa8.87□□□□□ -0.99
HPS4-201ENST00000336873 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 MYO3BQ8WXR4 1341 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 MEIS2O14770 477 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 VAMP7P51809 220 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 STRN3Q13033 797 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 NAB2Q15742 525 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 TMEM270Q6UE05 265 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 PPP1R21Q6ZMI0 780 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 ANKS4BQ8N8V4 417 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 USP38Q8NB14 1042 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 HNRNPLLQ8WVV9 542 aaKnown RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 BAP1Q92560 729 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 PWWP2AQ96N64 755 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 NAP1L4Q99733 375 aaKnown RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 PICK1Q9NRD5 415 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 KCNH7Q9NS40 1196 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 LSP1P33241 339 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 USP11P51784 963 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 PRELPP51888 382 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 ERVK-9P63128 1117 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 RASA3Q14644 834 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 CCDC137Q6PK04 289 aaKnown RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 TADA2BQ86TJ2 420 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 CPNE8Q86YQ8 564 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 SRRM1Q8IYB3 904 aaKnown RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 CCDC33Q8N5R6 958 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 FBXO25Q8TCJ0 367 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 AKT1S1Q96B36 256 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 ARHGEF26Q96DR7 871 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 CCT8L2Q96SF2 557 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.86□□□□□ -0.991e-9■■□□□ 14.2
HPS4-201ENST00000336873 NUP85Q9BW27 656 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 PLVAPQ9BX97 442 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 RAB17Q9H0T7 212 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 ZHX2Q9Y6X8 837 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 TRPM3Q9HCF6 1732 aaPredicted RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 SGPL1O95470 568 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 LMNB1P20700 586 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 STX2P32856 288 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 SOX5P35711 763 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 HSD17B3P37058 310 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 SESN3P58005 492 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 MTMR2Q13614 643 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 SLC29A2Q14542 456 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 CDO1Q16878 200 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 GKAP1Q5VSY0 366 aaPredicted RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 NCAPG2Q86XI2 1143 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 ZKSCAN4Q969J2 545 aaPredicted RBP8.86□□□□□ -0.99
HPS4-201ENST00000336873 NT5C1BQ96P26 610 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 C1orf112Q9NSG2 853 aa8.86□□□□□ -0.99
HPS4-201ENST00000336873 MYH13Q9UKX3 1938 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 GOLGA8RI6L899 631 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 SPAG7O75391 227 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 PIK3CAP42336 1068 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 NSFP46459 744 aaKnown RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 HMGCS2P54868 508 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 IRX4P78413 519 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 ZBTB16Q05516 673 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 NAA25Q14CX7 972 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 MEA1Q16626 185 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 WDR93Q6P2C0 686 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 CTAGE3PQ8IX95 158 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 XXYLT1Q8NBI6 393 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 DAGLBQ8NCG7 672 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 DEPTORQ8TB45 409 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 KRT35Q92764 455 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 TAAR1Q96RJ0 339 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 UNC45AQ9H3U1 944 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 SSU72P8A0A1W2PR75 194 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 INO80B-WBP1J3KQ70 363 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.999e-7■■■□□ 14.6
HPS4-201ENST00000336873 ZBED4O75132 1171 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 MMEP08473 750 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 COMTP21964 271 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 NUMBP49757 651 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms