RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TRAPPC3O43617 180 aa10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 CIITAP33076 1130 aa10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 FAM133AQ8N9E0 248 aa10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 PPP2R2CQ9Y2T4 447 aa10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 TOB1P50616 345 aaPredicted RBP10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 RSRC2Q7L4I2 434 aaKnown RBP10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 PRDM5Q9NQX1 630 aaPredicted RBP10.05□□□□□ -0.8
FNDC3B-201ENST00000336824 PSMC4P43686 418 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 A1CFQ9NQ94 594 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 SAR1BQ9Y6B6 198 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 A6NJR5 290 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 CEP104O60308 925 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 NMT1P30419 496 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 DCAF4L1Q3SXM0 396 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 SIX6OS1Q8N1H7 587 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 OR6B3Q8NGW1 331 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 NPHP3-ACAD11A0A0J9YXS1 232 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 GCLMP48507 274 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 NOL9Q5SY16 702 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 CD58P19256 250 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 PAK2Q13177 524 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 SLC5A5Q92911 643 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 ZNF653Q96CK0 615 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 HSPBP1Q9NZL4 362 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 CD4P01730 458 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 SAAL1Q96ER3 474 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 TCP1P17987 556 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 ATF7IP2Q5U623 682 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 DNAJC24Q6P3W2 148 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 FBXL13Q8NEE6 735 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 MKNK1Q9BUB5 465 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 CYP39A1Q9NYL5 469 aa10.04□□□□□ -0.8
FNDC3B-201ENST00000336824 SLX4Q8IY92 1834 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 A0A1W2PQC6 194 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 EIF3CLB5ME19 914 aaKnown RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SCYL2Q6P3W7 929 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 TRIM72Q6ZMU5 477 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 EIF3CQ99613 913 aaKnown RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 UBR3Q6ZT12 1888 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SP3Q02447 781 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 MUM1L1Q5H9M0 696 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SCARA5Q6ZMJ2 495 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 ADSSL1Q8N142 457 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 GRK7Q8WTQ7 553 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 HYOU1Q9Y4L1 999 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 LAMB2P55268 1798 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 IFRD2Q12894 506 aaPredicted RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 ACVR2BQ13705 512 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 IFT20Q8IY31 132 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 RUNDC3BQ96NL0 473 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 TUBE1Q9UJT0 475 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SCINQ9Y6U3 715 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 DCDC2CA8MYV0 355 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SNHG28P0DPA3 235 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 DNAJC12Q9UKB3 198 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 STRIP2Q9ULQ0 834 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 GPR182O15218 404 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 EDEM3Q9BZQ6 932 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 MAST2Q6P0Q8 1798 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 RNASE9P60153 205 aaKnown RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 BFSP2Q13515 415 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 TMEM132DQ14C87 1099 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 ANKRD40Q6AI12 368 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 GAS2L3Q86XJ1 694 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 ATP8B4Q8TF62 1192 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 SENP7Q9BQF6 1050 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 TRIM62Q9BVG3 475 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 NHEJ1Q9H9Q4 299 aaPredicted RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 DONSONQ9NYP3 566 aa10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 COL5A3P25940 1745 aaPredicted RBP10.03□□□□□ -0.8
FNDC3B-201ENST00000336824 PPFIA4O75335 1185 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 ACTN1P12814 892 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 ELMOD1Q8N336 334 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 HMX1Q9NP08 348 aaPredicted RBP10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 H3BRB1 525 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 RNF139Q8WU17 664 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 TUT1Q9H6E5 874 aaKnown RBP10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 AFG3L2Q9Y4W6 797 aa10.02□□□□□ -0.8
FNDC3B-201ENST00000336824 EMSYQ7Z589 1322 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 ZBBXA8MT70 800 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 ZBTB24O43167 697 aaPredicted RBP10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 EXTL3O43909 919 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 FAM110CQ1W6H9 321 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 AFG1LQ8WV93 481 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
FNDC3B-201ENST00000336824 IQCGQ9H095 443 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms