RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TGFB1I1O43294 461 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 GAP43P17677 238 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 POLD1P28340 1107 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 SPIRE1Q08AE8 756 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 UAP1Q16222 522 aaPredicted RBP17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 PARP9Q8IXQ6 854 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 RFFLQ8WZ73 363 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 A1CFQ9NQ94 594 aaKnown RBP17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 FAM114A2Q9NRY5 505 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 NYAP2Q9P242 653 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.45
CDC42EP4-201ENST00000335793 CYP3A7-CYP3A51PA0A087WV96 503 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 CYP3A7P24462 503 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 SLCO1A2P46721 670 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 PPP2R2AP63151 447 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 CBWD6Q4V339 395 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 LNX1Q8TBB1 728 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 TAS2R14Q9NYV8 317 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 PLIN4Q96Q06 1357 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 TBX3O15119 743 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 FAM107AO95990 144 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 PRKCIP41743 596 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 AADACL2Q6P093 401 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 C3orf20Q8ND61 904 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 STK33Q9BYT3 514 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 SLITRK6Q9H5Y7 841 aa17.83■□□□□ 0.44
CDC42EP4-201ENST00000335793 PHF20L1A8MW92 1017 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 DCDC2CA8MYV0 355 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 F8VZ95 297 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SREBF1P36956 1147 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 HHIPL2Q6UWX4 724 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 CD302Q8IX05 232 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 CYFIP2Q96F07 1278 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 CSRNP1Q96S65 589 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 INTS2Q9H0H0 1204 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 TCEAL9Q9UHQ7 104 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SUGT1Q9Y2Z0 365 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 RPS6KL1Q9Y6S9 549 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 K7ENM7 598 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 ADRA2BP18089 450 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 GNPTABQ3T906 1256 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 ARHGEF26Q96DR7 871 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 RSRC1Q96IZ7 334 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 NAP1L3Q99457 506 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 ZNF577Q9BSK1 485 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 FOXN3O00409 490 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SLC16A3O15427 465 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SNUPNO95149 360 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 RANBP1P43487 201 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 GCLMP48507 274 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 Q4G0T1 1027 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SIX2Q9NPC8 291 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 RGS17Q9UGC6 210 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 TMEM59LQ9UK28 342 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 PRR12Q9ULL5 1215 aa17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-201ENST00000335793 SPOPO43791 374 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 CTNND1O60716 968 aaKnown RBP17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 BCRP11274 1271 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 RWDD2BP57060 319 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 BIRC3Q13489 604 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 DENND2CQ68D51 928 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 CYB5D1Q6P9G0 228 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 LRIG3Q6UXM1 1119 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 CCDC105Q8IYK2 499 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 CACNA2D3Q8IZS8 1091 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 LENG9Q96B70 501 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 TACO1Q9BSH4 297 aaKnown RBP17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 RASAL2Q9UJF2 1139 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 SLITRK3O94933 977 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 TRIM37O94972 964 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 FTLP02792 175 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 FAM228AQ86W67 206 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 PALB2Q86YC2 1186 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 PNMA2Q9UL42 364 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
CDC42EP4-201ENST00000335793 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 POLR2MP0CAP2 368 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 HOXA10P31260 410 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 ECE1P42892 770 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 MOXD1Q6UVY6 613 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 EPM2AIP1Q7L775 607 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.8■□□□□ 0.448e-7■■■■■ 58.8
CDC42EP4-201ENST00000335793 APEX2Q9UBZ4 518 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 IGSF9BQ9UPX0 1349 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 RREB1Q92766 1687 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 RXRBP28702 533 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 IFNAR2P48551 515 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 STAT2P52630 851 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 PPM1KQ8N3J5 372 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 UBL4BQ8N7F7 174 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 DYDC1Q8WWB3 177 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms