RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 GUCY1A3Q02108 690 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 GPS1Q13098 491 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 RWDD4Q6NW29 188 aaKnown RBP17.04■□□□□ 0.32
TPCN1-201ENST00000335509 SH2D3CQ8N5H7 860 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 RIN2Q8WYP3 895 aaPredicted RBP17.04■□□□□ 0.32
TPCN1-201ENST00000335509 KLHL8Q9P2G9 620 aaPredicted RBP17.04■□□□□ 0.32
TPCN1-201ENST00000335509 SLC12A6Q9UHW9 1150 aa17.04■□□□□ 0.32
TPCN1-201ENST00000335509 GOLGA8CPA6NN73 597 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 GNGT2O14610 69 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 CHUKO15111 745 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 ECE2O60344 883 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 CSPG5O95196 566 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 LMBRD2Q68DH5 695 aaPredicted RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 KRT80Q6KB66 452 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 KIAA1841Q6NSI8 718 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 MS4A14Q96JA4 679 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 VPS39Q96JC1 886 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 ATP6V1G3Q96LB4 118 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 CACYBPQ9HB71 228 aaKnown RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 UBE4BO95155 1302 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 NPHP3-ACAD11A0A0J9YXS1 232 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 DCTN3O75935 186 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 SH3BGRP55822 239 aaPredicted RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 NFIXQ14938 502 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 SMAD1Q15797 465 aaKnown RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 EXT2Q93063 718 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 KPNA2P52292 529 aaKnown RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 ACTN3Q08043 901 aaPredicted RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 NOP53Q9NZM5 478 aaKnown RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 CRB1P82279 1406 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 MAP3K7O43318 606 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 HSPA4LO95757 839 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 XPAP23025 273 aaPredicted RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 GNA15P30679 374 aa17.03■□□□□ 0.32
TPCN1-201ENST00000335509 MRPL46Q9H2W6 279 aaKnown RBP17.03■□□□□ 0.32
TPCN1-201ENST00000335509 CTDNEP1O95476 244 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 S100BP04271 92 aaPredicted RBP17.02■□□□□ 0.32
TPCN1-201ENST00000335509 PMLP29590 882 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 SSTR3P32745 418 aaPredicted RBP17.02■□□□□ 0.32
TPCN1-201ENST00000335509 GRIN1Q05586 938 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 DPYDQ12882 1025 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 TRIM67Q6ZTA4 783 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 BZW1Q7L1Q6 419 aaKnown RBP17.02■□□□□ 0.32
TPCN1-201ENST00000335509 TRAIPQ9BWF2 469 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 VPS11Q9H270 941 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 BNIP3LO60238 219 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 PSMC1P62191 440 aaKnown RBP17.02■□□□□ 0.32
TPCN1-201ENST00000335509 PDIA5Q14554 519 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 AP1ARQ63HQ0 302 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 FBXL13Q8NEE6 735 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 ADAM33Q9BZ11 813 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 MID2Q9UJV3 735 aa17.02■□□□□ 0.32
TPCN1-201ENST00000335509 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 CALB1P05937 261 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 SPDYE6P0CI01 402 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 SOX5P35711 763 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 NR1I3Q14994 352 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 EP400NLQ6ZTU2 488 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 SLITRK6Q9H5Y7 841 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 SPATS2LQ9NUQ6 558 aaKnown RBP17.02■□□□□ 0.31
TPCN1-201ENST00000335509 PPME1Q9Y570 386 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 TYW5A2RUC4 315 aaKnown RBP17.02■□□□□ 0.31
TPCN1-201ENST00000335509 ARL13BQ3SXY8 428 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 NLRP14Q86W24 1093 aa17.02■□□□□ 0.31
TPCN1-201ENST00000335509 F5H423 210 aaPredicted RBP17.01■□□□□ 0.31
TPCN1-201ENST00000335509 EPHB1P54762 984 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
TPCN1-201ENST00000335509 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
TPCN1-201ENST00000335509 LCA5Q86VQ0 697 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 CHMP6Q96FZ7 201 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 SLC9A2Q9UBY0 812 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 GRID2IPA4D2P6 1211 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 CYP26A1O43174 497 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 SRGNP10124 158 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 SDC4P31431 198 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 PSMC5P62195 406 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 SLC18A3Q16572 532 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 ZBED8Q8IZ13 594 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 LRRC37BQ96QE4 947 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 ETNK1Q9HBU6 452 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 KCNJ6P48051 423 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 ESRRGP62508 458 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 PDIA2Q13087 525 aaKnown RBP17.01■□□□□ 0.31
TPCN1-201ENST00000335509 RASGRP2Q7LDG7 609 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 PDXKO00764 312 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 KITP10721 976 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
TPCN1-201ENST00000335509 SEMA3FQ13275 785 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 RHOT1Q8IXI2 618 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 EPB41L4AQ9HCS5 686 aaPredicted RBP17.01■□□□□ 0.31
TPCN1-201ENST00000335509 SMARCAL1Q9NZC9 954 aa17.01■□□□□ 0.31
TPCN1-201ENST00000335509 ANKRD20A4Q4UJ75 823 aa17■□□□□ 0.31
TPCN1-201ENST00000335509 ANKRD20A8PQ5CZ79 823 aa17■□□□□ 0.31
TPCN1-201ENST00000335509 ANKRD20A2Q5SQ80 823 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms