RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 UBIAD1Q9Y5Z9 338 aa19.2■□□□□ 0.66
LRCH3-201ENST00000334859 ZNF233A6NK53 670 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 CCDC188H7C350 402 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
LRCH3-201ENST00000334859 PPP3CAQ08209 521 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 SPP2Q13103 211 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 CUL1Q13616 776 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 KCTD19Q17RG1 926 aaPredicted RBP19.19■□□□□ 0.66
LRCH3-201ENST00000334859 IQCKQ8N0W5 287 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 SH2D3CQ8N5H7 860 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 SYTL5Q8TDW5 730 aaPredicted RBP19.19■□□□□ 0.66
LRCH3-201ENST00000334859 SLC20A1Q8WUM9 679 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 THAP2Q9H0W7 228 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 HSPBP1Q9NZL4 362 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 LCMT1Q9UIC8 334 aa19.19■□□□□ 0.66
LRCH3-201ENST00000334859 RRP15Q9Y3B9 282 aaKnown RBP19.19■□□□□ 0.66
LRCH3-201ENST00000334859 PPFIA4O75335 1185 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 DPEP1P16444 411 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 RXRBP28702 533 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 PRPF4BQ13523 1007 aaKnown RBP19.18■□□□□ 0.66
LRCH3-201ENST00000334859 RASA3Q14644 834 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 KIF22Q14807 665 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 UGCGQ16739 394 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 TTC19Q6DKK2 380 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-201ENST00000334859 HAUS6Q7Z4H7 955 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 MAATS1Q7Z4T9 603 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 DDX42Q86XP3 938 aaKnown RBP eCLIP19.18■□□□□ 0.66
LRCH3-201ENST00000334859 ARHGEF19Q8IW93 802 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 LMO3Q8TAP4 145 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 LPAR1Q92633 364 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 GPRC5CQ9NQ84 441 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.18■□□□□ 0.669e-25■■■■■ 288.4
LRCH3-201ENST00000334859 PGAP2Q9UHJ9 254 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 AMACRQ9UHK6 382 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 PPP1R9AQ9ULJ8 1098 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 DAAM1Q9Y4D1 1078 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-201ENST00000334859 TULP2O00295 520 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 SLC16A4O15374 487 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 FGGP02679 453 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 CXCL9Q07325 125 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 SRLQ86TD4 932 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 RASGEF1CQ8N431 466 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 AGPAT1Q99943 283 aa19.18■□□□□ 0.66
LRCH3-201ENST00000334859 PHF20L1A8MW92 1017 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 BACH1O14867 736 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 CLSTN1O94985 981 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 MAPTP10636 758 aaKnown RBP19.17■□□□□ 0.66
LRCH3-201ENST00000334859 USP8P40818 1118 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 IRAK1P51617 712 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 PEX3P56589 373 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 RPS6P62753 249 aaKnown RBP19.17■□□□□ 0.66
LRCH3-201ENST00000334859 GNGT1P63211 74 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 NAA35Q5VZE5 725 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 ZSWIM2Q8NEG5 633 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 PIK3R5Q8WYR1 880 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 TAAR1Q96RJ0 339 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 SLC38A10Q9HBR0 1119 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 MYOZ2Q9NPC6 264 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 TBC1D22BQ9NU19 505 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 FAM102BQ5T8I3 360 aa19.17■□□□□ 0.66
LRCH3-201ENST00000334859 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.17■□□□□ 0.669e-10■■■■■ 79.8
LRCH3-201ENST00000334859 ASTN2O75129 1339 aaPredicted RBP19.17■□□□□ 0.66
LRCH3-201ENST00000334859 ANKRD62A6NC57 917 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 ECHS1P30084 290 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 HSPA9P38646 679 aaKnown RBP19.16■□□□□ 0.66
LRCH3-201ENST00000334859 MXI1P50539 228 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 MAP3K10Q02779 954 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 PGM5Q15124 567 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 PLA2G4FQ68DD2 849 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 RABEP2Q9H5N1 569 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 SLITRK6Q9H5Y7 841 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 PLAAQ9Y263 795 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 TESPA1A2RU30 521 aaPredicted RBP19.16■□□□□ 0.66
LRCH3-201ENST00000334859 GOLGA8IPA6NC78 632 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 GOLGA8JA6NMD2 632 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 MYO1CO00159 1063 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 TTI1O43156 1089 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 ATP1A2P50993 1020 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 PPATQ06203 517 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 XKR9Q5GH70 373 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 NSMFQ6X4W1 530 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 CCDC26Q8TAB7 109 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 ZBED3Q96IU2 234 aaPredicted RBP19.16■□□□□ 0.66
LRCH3-201ENST00000334859 RMDN3Q96TC7 470 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 KIAA1683Q9H0B3 1180 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 COG5Q9UP83 839 aa19.16■□□□□ 0.66
LRCH3-201ENST00000334859 LYPLA2O95372 231 aa19.15■□□□□ 0.66
LRCH3-201ENST00000334859 MTMR2Q13614 643 aa19.15■□□□□ 0.66
LRCH3-201ENST00000334859 EPC2Q52LR7 807 aa19.15■□□□□ 0.66
LRCH3-201ENST00000334859 DCAF12L1Q5VU92 463 aa19.15■□□□□ 0.66
LRCH3-201ENST00000334859 ZNF746Q6NUN9 644 aaPredicted RBP19.15■□□□□ 0.66
LRCH3-201ENST00000334859 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
LRCH3-201ENST00000334859 C12orf56Q8IXR9 622 aa19.15■□□□□ 0.66
LRCH3-201ENST00000334859 EIF1ADQ8N9N8 165 aaKnown RBP19.15■□□□□ 0.66
LRCH3-201ENST00000334859 RNPC3Q96LT9 517 aaKnown RBP19.15■□□□□ 0.66
LRCH3-201ENST00000334859 CELF4Q9BZC1 486 aaKnown RBP19.15■□□□□ 0.66
LRCH3-201ENST00000334859 CTTNBP2NLQ9P2B4 639 aa19.15■□□□□ 0.66
LRCH3-201ENST00000334859 GRIN2DO15399 1336 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms