RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 IGFLR1Q9H665 355 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 SH2B1Q9NRF2 756 aaPredicted RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 CLDND1Q9NY35 253 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 COL4A3BPQ9Y5P4 624 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 EVPLQ92817 2033 aa12.52□□□□□ -0.4
C9orf85-201ENST00000334731 FGF18O76093 207 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 SRGAP2CP0DJJ0 459 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 IL9P15248 144 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 LAG3P18627 525 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 MCM7P33993 719 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 HMGN5P82970 282 aaKnown RBP12.52□□□□□ -0.41
C9orf85-201ENST00000334731 UBE3AQ05086 875 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 DLX2Q07687 328 aaPredicted RBP12.52□□□□□ -0.41
C9orf85-201ENST00000334731 LAMTOR4Q0VGL1 99 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 ADAM15Q13444 863 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 EMC2Q15006 297 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 CATSPER4Q7RTX7 472 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 ABI1Q8IZP0 508 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.41
C9orf85-201ENST00000334731 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
C9orf85-201ENST00000334731 CD320Q9NPF0 282 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 ANKEF1Q9NU02 776 aa12.52□□□□□ -0.41
C9orf85-201ENST00000334731 BRWD1Q9NSI6 2320 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 NCOR1O75376 2440 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 LINC01565O15544 149 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 ASAP2O43150 1006 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
C9orf85-201ENST00000334731 ZNF623O75123 536 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 PHKA2P46019 1235 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 ERVFC1P60507 584 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 ZNF174Q15697 407 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 TWF2Q6IBS0 349 aaKnown RBP12.51□□□□□ -0.41
C9orf85-201ENST00000334731 KCNT2Q6UVM3 1135 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 ADGRD2Q7Z7M1 963 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 FAM178BQ8IXR5 827 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 THNSL1Q8IYQ7 743 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 LRRC43Q8N309 656 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 MICAL1Q8TDZ2 1067 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 PPP2R3CQ969Q6 453 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 MINDY3Q9H8M7 445 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 XPNPEP1Q9NQW7 623 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 PIN4Q9Y237 131 aaKnown RBP12.51□□□□□ -0.41
C9orf85-201ENST00000334731 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 RALGAPA2Q2PPJ7 1873 aa12.51□□□□□ -0.41
C9orf85-201ENST00000334731 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 A0A087WWV3 80 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 SPATA31C1P0DKV0 1188 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
C9orf85-201ENST00000334731 HOXA11P31270 313 aaPredicted RBP12.5□□□□□ -0.41
C9orf85-201ENST00000334731 PLCB3Q01970 1234 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 RABEP1Q15276 862 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 RBM23Q86U06 439 aaKnown RBP12.5□□□□□ -0.41
C9orf85-201ENST00000334731 EFHBQ8N7U6 833 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 FAM184AQ8NB25 1140 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 RNF149Q8NC42 400 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 PIGOQ8TEQ8 1089 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 LPPQ93052 612 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 ZNF558Q96NG5 402 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 MTRQ99707 1265 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 TLR9Q9NR96 1032 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 AGPAT5Q9NUQ2 364 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 FAM105AQ9NUU6 356 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 LZTS1Q9Y250 596 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 MYO7AQ13402 2215 aa12.5□□□□□ -0.41
C9orf85-201ENST00000334731 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 FSCN2O14926 492 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 TBX10O75333 385 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 OFD1O75665 1012 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 DGAT1O75907 488 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 SKIP12755 728 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 ARL2P36404 184 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 PBX3P40426 434 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 TECP42680 631 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 NRIP1P48552 1158 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 RARRES1P49788 294 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 RAB27AP51159 221 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 ORC2Q13416 577 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 MXD4Q14582 209 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 CLUL1Q15846 466 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 LONRF3Q496Y0 759 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 PDE12Q6L8Q7 609 aaKnown RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 GJD3Q8N144 294 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 MRPS27Q92552 414 aaKnown RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 TLE6Q9H808 572 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 SPG21Q9NZD8 308 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 CLEC1BQ9P126 229 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 PUF60Q9UHX1 559 aaKnown RBP12.49□□□□□ -0.41
C9orf85-201ENST00000334731 FAM50BQ9Y247 325 aa12.49□□□□□ -0.41
C9orf85-201ENST00000334731 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms