RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 HOOK3Q86VS8 718 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 MTRQ99707 1265 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 UNC45AQ9H3U1 944 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 AGO4Q9HCK5 861 aaKnown RBP12.78□□□□□ -0.36
HDAC6-201ENST00000334136 EPB41L5Q9HCM4 733 aa12.78□□□□□ -0.36
HDAC6-201ENST00000334136 SLC10A3P09131 477 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 MAGEA9P43362 315 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 PRKCEQ02156 737 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 PPP1R7Q15435 360 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 NAA35Q5VZE5 725 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 METTL7BQ6UX53 244 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 AFG1LQ8WV93 481 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 MRRFQ96E11 262 aaKnown RBP12.77□□□□□ -0.36
HDAC6-201ENST00000334136 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.36
HDAC6-201ENST00000334136 GOLGA8KD6RF30 607 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
HDAC6-201ENST00000334136 AKR1A1P14550 325 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 CA8P35219 290 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 PDCLQ13371 301 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 CUL4BQ13620 913 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 PEX26Q7Z412 305 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 MGARPQ8TDB4 240 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 ACCSQ96QU6 501 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 KRT12Q99456 494 aa12.77□□□□□ -0.36
HDAC6-201ENST00000334136 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
HDAC6-201ENST00000334136 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
HDAC6-201ENST00000334136 GRIN1Q05586 938 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 PTPAQ15257 358 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 ASIC2Q16515 512 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 SFMBT2Q5VUG0 894 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 KIFAP3Q92845 792 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 ZNF668Q96K58 619 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-201ENST00000334136 APBA2Q99767 749 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-201ENST00000334136 GDAQ9Y2T3 454 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.37
HDAC6-201ENST00000334136 ADCYAP1R1P41586 468 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 PLA2G4AP47712 749 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 CALCOCO2Q13137 446 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 UNC13DQ70J99 1090 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 NIPA1Q7RTP0 329 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 CATSPER4Q7RTX7 472 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 RHPN2Q8IUC4 686 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 LRRN4CLQ8ND94 238 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-201ENST00000334136 TBC1D31Q96DN5 1066 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 SLC45A1Q9Y2W3 748 aa12.77□□□□□ -0.37
HDAC6-201ENST00000334136 COL4A1P02462 1669 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 NKRFO15226 690 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CYP3A4P08684 503 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CLTAP09496 248 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 TNNI1P19237 187 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 PSMD2Q13200 908 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 TRPC3Q13507 836 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 PRAMEF19Q5SWL8 479 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 IQSEC1Q6DN90 963 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
HDAC6-201ENST00000334136 HBP1O60381 514 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 DGAT1O75907 488 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CCDC172P0C7W6 258 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 ADAM9Q13443 819 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 IL31RAQ8NI17 732 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 HEXIM1O94992 359 aaKnown RBP12.76□□□□□ -0.37
HDAC6-201ENST00000334136 ABCD1P33897 745 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 GGCXP38435 758 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 HSD17B4P51659 736 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 HTRA3P83110 453 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CST9Q5W186 159 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 SFR1Q86XK3 245 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CATSPER3Q86XQ3 398 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 CACNA2D3Q8IZS8 1091 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 APOL6Q9BWW8 343 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 TMEM206Q9H813 350 aa12.76□□□□□ -0.37
HDAC6-201ENST00000334136 MOCS3O95396 460 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 NPEPPSP55786 919 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 NEBLO76041 1014 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 PRPF6O94906 941 aaKnown RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 SUPT20HL2P0C7V6 817 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 ABCB4P21439 1286 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 YARSP54577 528 aaKnown RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 SRLQ86TD4 932 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 TADA2BQ86TJ2 420 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 RNF208Q9H0X6 261 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 ARMCX3Q9UH62 379 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 FEZ2Q9UHY8 353 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-201ENST00000334136 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
HDAC6-201ENST00000334136 MAGEB2O15479 319 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms