RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
SHOX-201ENST00000334060 SCLYQ96I15 445 aa18.2■□□□□ 0.5
SHOX-201ENST00000334060 SEMA6BQ9H3T3 888 aa18.2■□□□□ 0.5
SHOX-201ENST00000334060 AGO3Q9H9G7 860 aaKnown RBP18.2■□□□□ 0.5
SHOX-201ENST00000334060 OLFML3Q9NRN5 406 aa18.2■□□□□ 0.5
SHOX-201ENST00000334060 FSD2A1L4K1 749 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 CKBP12277 381 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 MBTD1Q05BQ5 628 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 NECAB2Q7Z6G3 386 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 ANKLE1Q8NAG6 615 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 ZBTB45Q96K62 511 aaPredicted RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 LRRC27Q9C0I9 530 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 HAPLN2Q9GZV7 340 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 CCDC113Q9H0I3 377 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 LARSQ9P2J5 1176 aaKnown RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 HOOK1Q9UJC3 728 aaKnown RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 CTNND2Q9UQB3 1225 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 SCN5AQ14524 2016 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 TRIM43BA6NCK2 446 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 ANKRD63C9JTQ0 380 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 TNRC18O15417 2968 aaPredicted RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 GNAT1P11488 350 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 NAMPTP43490 491 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 CCL23P55773 120 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 AMHR2Q16671 573 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 HSP90AA4PQ58FG1 418 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 CDCA2Q69YH5 1023 aaPredicted RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 ANKRD33Q7Z3H0 272 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 ADSSL1Q8N142 457 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 TRIM43Q96BQ3 446 aaPredicted RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 CPB2Q96IY4 423 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 SCLT1Q96NL6 688 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 MAP7D2Q96T17 732 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 WNT8AQ9H1J5 351 aa18.19■□□□□ 0.5
SHOX-201ENST00000334060 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
SHOX-201ENST00000334060 INO80B-WBP1J3KQ70 363 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 TGFB1I1O43294 461 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 GHRP10912 638 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 TMOD1P28289 359 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 CYP2C18P33260 490 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 DNM2P50570 870 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 PTENP60484 403 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 MRPS6P82932 125 aaKnown RBP18.18■□□□□ 0.5
SHOX-201ENST00000334060 PTK7Q13308 1070 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 SASS6Q6UVJ0 657 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 DEPTORQ8TB45 409 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 TCP11Q8WWU5 503 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 VWCEQ96DN2 955 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 NTPCRQ9BSD7 190 aaKnown RBP18.18■□□□□ 0.5
SHOX-201ENST00000334060 INO80BQ9C086 356 aaPredicted RBP18.18■□□□□ 0.5
SHOX-201ENST00000334060 PPME1Q9Y570 386 aa18.18■□□□□ 0.5
SHOX-201ENST00000334060 GAP43P17677 238 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 MRE11P49959 708 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 TAF2Q6P1X5 1199 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 SPIRE2Q8WWL2 714 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 IFT74Q96LB3 600 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 TIPINQ9BVW5 301 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 TARS2Q9BW92 718 aaKnown RBP18.17■□□□□ 0.5
SHOX-201ENST00000334060 TBX20Q9UMR3 447 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 CLIC2O15247 247 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 GTF2BQ00403 316 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 PTPN11Q06124 597 aaPredicted RBP18.17■□□□□ 0.5
SHOX-201ENST00000334060 SEZ6Q53EL9 994 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 EEF1DP3Q658K8 133 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 RNF214Q8ND24 703 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 NOC4LQ9BVI4 516 aaKnown RBP18.17■□□□□ 0.5
SHOX-201ENST00000334060 CELF4Q9BZC1 486 aaKnown RBP18.17■□□□□ 0.5
SHOX-201ENST00000334060 KCTD10Q9H3F6 313 aa18.17■□□□□ 0.5
SHOX-201ENST00000334060 RRAGDQ9NQL2 400 aaPredicted RBP18.17■□□□□ 0.5
SHOX-201ENST00000334060 GAS2O43903 313 aaKnown RBP18.16■□□□□ 0.5
SHOX-201ENST00000334060 MXD4Q14582 209 aaPredicted RBP18.16■□□□□ 0.5
SHOX-201ENST00000334060 LRSAM1Q6UWE0 723 aa18.16■□□□□ 0.5
SHOX-201ENST00000334060 FAM228AQ86W67 206 aa18.16■□□□□ 0.5
SHOX-201ENST00000334060 JPH2Q9BR39 696 aaPredicted RBP18.16■□□□□ 0.5
SHOX-201ENST00000334060 PRDM5Q9NQX1 630 aaPredicted RBP18.16■□□□□ 0.5
SHOX-201ENST00000334060 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
SHOX-201ENST00000334060 NBNO60934 754 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
SHOX-201ENST00000334060 ADSSP30520 456 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 ZBTB41Q5SVQ8 909 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 ANKRD40Q6AI12 368 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 TMEM130Q8N3G9 435 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 ZNF507Q8TCN5 953 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 CCDC34Q96HJ3 373 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 RMND1Q9NWS8 449 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 PRKCBP05771 671 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 TPM2P07951 284 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 SYN1P17600 705 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 CD52P31358 61 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 ZNF445P59923 1031 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 LPIN1Q14693 890 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 STX1AQ16623 288 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 MYOCDQ8IZQ8 938 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 NELFBQ8WX92 580 aa18.15■□□□□ 0.5
SHOX-201ENST00000334060 DUSP9Q99956 384 aaKnown RBP18.15■□□□□ 0.5
SHOX-201ENST00000334060 CXCL16Q9H2A7 254 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 382.6 ms