RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CIITAP33076 1130 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 FAM178BQ8IXR5 827 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 CNPY4Q8N129 248 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 LARGE2Q8N3Y3 721 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 SLITRK6Q9H5Y7 841 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 AGPAT3Q9NRZ7 376 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 GMNCA6NCL1 334 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 TCP10L2B9ZVM9 353 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 TNFAIP3P21580 790 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 MNAT1P51948 309 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 PLTPP55058 493 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 ODR4Q5SWX8 454 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 ZNF720Q7Z2F6 126 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
VPS33B-201ENST00000333371 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 FMO2Q99518 471 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 PNMA2Q9UL42 364 aa13.34□□□□□ -0.27
VPS33B-201ENST00000333371 TLDC2A0PJX2 215 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 GTPBP10A4D1E9 387 aaKnown RBP13.33□□□□□ -0.27
VPS33B-201ENST00000333371 TRAPPC3O43617 180 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 RAD17O75943 681 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 TMEM253P0C7T8 217 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 ARP10275 920 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 KRT13P13646 458 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 DR1Q01658 176 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 IFFO1Q0D2I5 559 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.27
VPS33B-201ENST00000333371 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 ZDHHC14Q8IZN3 488 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 C1orf131Q8NDD1 294 aaKnown RBP13.33□□□□□ -0.27
VPS33B-201ENST00000333371 KAT5Q92993 513 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 EPB41L4BQ9H329 900 aa13.33□□□□□ -0.27
VPS33B-201ENST00000333371 NCANO14594 1321 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 CLRN2A0PK11 232 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 SLC26A4O43511 780 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 PSMD10O75832 226 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 CLSTN1O94985 981 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.28
VPS33B-201ENST00000333371 LMNB1P20700 586 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 MYL7Q01449 175 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 BYSLQ13895 437 aaKnown RBP13.33□□□□□ -0.28
VPS33B-201ENST00000333371 C6orf89Q6UWU4 347 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 SEC14L1Q92503 715 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS33B-201ENST00000333371 APEX2Q9UBZ4 518 aa13.33□□□□□ -0.28
VPS33B-201ENST00000333371 PPP1R12BO60237 982 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 EXOC3O60645 756 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 FSBPO95073 299 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 GAP43P17677 238 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 USP8P40818 1118 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 MMP14P50281 582 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 NPEPPSP55786 919 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 PTENP60484 403 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 RSBN1LQ6PCB5 846 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 POTEAQ6S8J7 498 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 RUFY4Q6ZNE9 571 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 CCDC13Q8IYE1 715 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 EIF1ADQ8N9N8 165 aaKnown RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 FBXO25Q8TCJ0 367 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 BTBD6Q96KE9 485 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 OSBPL7Q9BZF2 842 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 PDGFDQ9GZP0 370 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ALG6Q9Y672 507 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 FRMPD4Q14CM0 1322 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 TCRBV7S2A1N4TA0A589 114 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 GAS7O60861 476 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 DLGAP5Q15398 846 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 SUGP1Q8IWZ8 645 aaKnown RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 SYCP3Q8IZU3 236 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 UNC45AQ9H3U1 944 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ZDHHC18Q9NUE0 388 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 FRMD4BQ9Y2L6 1034 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ZNFX1Q9P2E3 1918 aaKnown RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 DNM1LO00429 736 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 EIF3DO15371 548 aaKnown RBP eCLIP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 BIRC3Q13489 604 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 DAW1Q8N136 415 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 GMCL1P1Q8NEA9 526 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-201ENST00000333371 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 CTTNBP2NLQ9P2B4 639 aa13.32□□□□□ -0.28
VPS33B-201ENST00000333371 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms