RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KIAA1217Q5T5P2 1943 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 ATP2A1O14983 1001 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 RGS20O76081 388 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 KCNA2P16389 499 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 GSPT2Q8IYD1 628 aaKnown RBP18.9■□□□□ 0.62
DDX28-201ENST00000332395 LRRC57Q8N9N7 239 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 ZSWIM2Q8NEG5 633 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 GPRC5DQ9NZD1 345 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 TMOD4Q9NZQ9 345 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 DMGDHQ9UI17 866 aaKnown RBP18.9■□□□□ 0.62
DDX28-201ENST00000332395 SSC5DA1L4H1 1573 aa18.9■□□□□ 0.62
DDX28-201ENST00000332395 MAPK13O15264 365 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 N4BP1O75113 896 aaKnown RBP18.89■□□□□ 0.62
DDX28-201ENST00000332395 CCDC172P0C7W6 258 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 LMNB1P20700 586 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 TNNT3P45378 269 aaPredicted RBP18.89■□□□□ 0.62
DDX28-201ENST00000332395 PPP3CAQ08209 521 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.62
DDX28-201ENST00000332395 ARHGAP44Q17R89 818 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 GLYCTKQ8IVS8 523 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 SYT11Q9BT88 431 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 ACAD9Q9H845 621 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.62
DDX28-201ENST00000332395 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 GABBR1Q9UBS5 961 aa18.89■□□□□ 0.62
DDX28-201ENST00000332395 WDR81Q562E7 1941 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 A0A0A6YYK5 440 aaPredicted RBP18.89■□□□□ 0.61
DDX28-201ENST00000332395 CCDC169A6NNP5 214 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 P4HA2O15460 535 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 NPTX2P47972 431 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 SMTNP53814 917 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 CETN1Q12798 172 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 DMP1Q13316 513 aaPredicted RBP18.89■□□□□ 0.61
DDX28-201ENST00000332395 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 CCDC125Q86Z20 511 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 TMEM161BQ8NDZ6 487 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 TPCN2Q8NHX9 752 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 HINFPQ9BQA5 517 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 ACBD3Q9H3P7 528 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 GOLPH3Q9H4A6 298 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 VIPAS39Q9H9C1 493 aa18.89■□□□□ 0.61
DDX28-201ENST00000332395 ZNF862O60290 1169 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 GCLMP48507 274 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 MRPS25P82663 173 aaKnown RBP18.88■□□□□ 0.61
DDX28-201ENST00000332395 RPS6KA1Q15418 735 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 C8orf74Q6P047 294 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 OTUD6AQ7L8S5 288 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 ATP6V0A1Q93050 837 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 TBX20Q9UMR3 447 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 EXOC7Q9UPT5 735 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 PPP2R3BQ9Y5P8 575 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 LRRN2O75325 713 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 KIF4AO95239 1232 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 GALCP54803 685 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 SLC7A5Q01650 507 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 EPC2Q52LR7 807 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
DDX28-201ENST00000332395 PLEKHO2Q8TD55 490 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 TAF4BQ92750 862 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 ZBTB9Q96C00 473 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 CEP170P1Q96L14 293 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 KIFC3Q9BVG8 833 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 SELENOOQ9BVL4 669 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 JPH1Q9HDC5 661 aaPredicted RBP18.88■□□□□ 0.61
DDX28-201ENST00000332395 STIM2Q9P246 746 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 AFG3L2Q9Y4W6 797 aa18.88■□□□□ 0.61
DDX28-201ENST00000332395 SPDYE16A6NNV3 312 aaPredicted RBP18.87■□□□□ 0.61
DDX28-201ENST00000332395 CES2O00748 559 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 MAP4K3Q8IVH8 894 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 NLGN2Q8NFZ4 835 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 KIFAP3Q92845 792 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 HVCN1Q96D96 273 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 CDHR1Q96JP9 859 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 TELO2Q9Y4R8 837 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 NFASCO94856 1347 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 DOCK5Q9H7D0 1870 aa18.87■□□□□ 0.61
DDX28-201ENST00000332395 GOLGA8IPA6NC78 632 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 GOLGA8JA6NMD2 632 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 ANKRD63C9JTQ0 380 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 FOXN3O00409 490 aaPredicted RBP18.86■□□□□ 0.61
DDX28-201ENST00000332395 KCNK3O14649 394 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 DKC1O60832 514 aaKnown RBP eCLIP18.86■□□□□ 0.61
DDX28-201ENST00000332395 STBD1O95210 358 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 ADRB2P07550 413 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 PSAPP07602 524 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 ADSSP30520 456 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 HIRAP54198 1017 aaPredicted RBP18.86■□□□□ 0.61
DDX28-201ENST00000332395 KIF22Q14807 665 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 GLE1Q53GS7 698 aaKnown RBP18.86■□□□□ 0.61
DDX28-201ENST00000332395 SWSAP1Q6NVH7 229 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 AENQ8WTP8 325 aaKnown RBP18.86■□□□□ 0.61
DDX28-201ENST00000332395 BSNDQ8WZ55 320 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 GDAP1L1Q96MZ0 367 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 UBE2TQ9NPD8 197 aaPredicted RBP18.86■□□□□ 0.61
DDX28-201ENST00000332395 KMT5AQ9NQR1 393 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 HOXC10Q9NYD6 342 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 SLC9A2Q9UBY0 812 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 ARID2Q68CP9 1835 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 DENND3A2RUS2 1198 aa18.86■□□□□ 0.61
DDX28-201ENST00000332395 STAM2O75886 525 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms