RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 AGPSO00116 658 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 CEP104O60308 925 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 HEXIM1O94992 359 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 PTPRAP18433 802 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 LMNB1P20700 586 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 SOX10P56693 466 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 KRT76Q01546 638 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 GUCY2DQ02846 1103 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 GLE1Q53GS7 698 aaKnown RBP16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 C1orf220Q5T0J3 134 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 ANO5Q75V66 913 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 DAAM2Q86T65 1068 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 ARHGEF19Q8IW93 802 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 ZNF280CQ8ND82 737 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 UBE2TQ9NPD8 197 aaPredicted RBP16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 TELO2Q9Y4R8 837 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 DOCK1Q14185 1865 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 CCDC169A6NNP5 214 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 NR3C2P08235 984 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 KLHL7Q8IXQ5 586 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 FAM204AQ9H8W3 233 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 INTUQ9ULD6 942 aa16.13■□□□□ 0.17
CLCNKA-201ENST00000331433 A0A0A6YYK5 440 aaPredicted RBP16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 SORBS3O60504 671 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 ADRB2P07550 413 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 ZBTB48P10074 688 aaPredicted RBP16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 SFNP31947 248 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 CARSP49589 748 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 EPHB4P54760 987 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 NCKAP1LP55160 1127 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 SP4Q02446 784 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 VSIG10LQ86VR7 867 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 METTL13Q8N6R0 699 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 REPS2Q8NFH8 660 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 IFT81Q8WYA0 676 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 PICK1Q9NRD5 415 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 KIAA1217Q5T5P2 1943 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 GOLGA6BA6NDN3 693 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 CCND2P30279 289 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 TRADDQ15628 312 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 SLFN11Q7Z7L1 901 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 NLRX1Q86UT6 975 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 C12orf56Q8IXR9 622 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 SLC35G2Q8TBE7 412 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 MOV10L1Q9BXT6 1211 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 ST6GALNAC4Q9H4F1 302 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 NFU1Q9UMS0 254 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 RLFQ13129 1914 aa16.12■□□□□ 0.17
CLCNKA-201ENST00000331433 ANKRD63C9JTQ0 380 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 RAD51CO43502 376 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 RGS20O76081 388 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 TNFAIP3P21580 790 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 ADSSP30520 456 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 KCTD19Q17RG1 926 aaPredicted RBP16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 EPC2Q52LR7 807 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 CBWD2Q8IUF1 395 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 IFT20Q8IY31 132 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 TSEN2Q8NCE0 465 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 BSNDQ8WZ55 320 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 KAT5Q92993 513 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 ARHGEF26Q96DR7 871 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 AP1M1Q9BXS5 423 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 GABBR1Q9UBS5 961 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 TMEM59LQ9UK28 342 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 PCDHA10Q9Y5I2 948 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 DOCK5Q9H7D0 1870 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 CES2O00748 559 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 ZNF862O60290 1169 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 TNFRSF8P28908 595 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 NPTX2P47972 431 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 CETN1Q12798 172 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 KIF22Q14807 665 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 EMBQ6PCB8 327 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 NT5DC3Q86UY8 548 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 TMEM161BQ8NDZ6 487 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 LMBR1Q8WVP7 490 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 PBKQ96KB5 322 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 AS3MTQ9HBK9 375 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 ANKEF1Q9NU02 776 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 PSD3Q9NYI0 1048 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 STXBP5LQ9Y2K9 1186 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 WDR81Q562E7 1941 aa16.11■□□□□ 0.17
CLCNKA-201ENST00000331433 FZD9O00144 591 aa16.1■□□□□ 0.17
CLCNKA-201ENST00000331433 TMEM253P0C7T8 217 aa16.1■□□□□ 0.17
CLCNKA-201ENST00000331433 CCDC172P0C7W6 258 aa16.1■□□□□ 0.17
CLCNKA-201ENST00000331433 FDX1P10109 184 aa16.1■□□□□ 0.17
CLCNKA-201ENST00000331433 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
CLCNKA-201ENST00000331433 TMEM174Q8WUU8 243 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms