RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 DEF6Q9H4E7 631 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 MMRN2Q9H8L6 949 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 HERC5Q9UII4 1024 aaKnown RBP9.52□□□□□ -0.89
CPNE8-201ENST00000331366 DICER1Q9UPY3 1922 aaKnown RBP9.52□□□□□ -0.89
CPNE8-201ENST00000331366 MEIS1O00470 390 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 ABLIM1O14639 778 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 PIGRP01833 764 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 UBR7Q8N806 425 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
CPNE8-201ENST00000331366 CAPZA3Q96KX2 299 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 PACSIN1Q9BY11 444 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 OSBPL7Q9BZF2 842 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 ATP6V0A4Q9HBG4 840 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 DNM3Q9UQ16 869 aa9.52□□□□□ -0.89
CPNE8-201ENST00000331366 BAZ2BQ9UIF8 2168 aaKnown RBP9.52□□□□□ -0.89
CPNE8-201ENST00000331366 E7ENQ6 273 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TRAF5O00463 557 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 GRIN3BO60391 1043 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 RTN2O75298 545 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 MYBL1P10243 752 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 IVDP26440 423 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 SLC8A3P57103 927 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 SYDE2Q5VT97 1194 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 GSPT2Q8IYD1 628 aaKnown RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 GBP7Q8N8V2 638 aaPredicted RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 MAIP1Q8WWC4 291 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 SHC3Q92529 594 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TMEM237Q96Q45 408 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TLE6Q9H808 572 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TMEM206Q9H813 350 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 COBLO75128 1261 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 CENPCQ03188 943 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 GRM1Q13255 1194 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 CCDC40Q4G0X9 1142 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 CCDC91Q7Z6B0 441 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 MS4A14Q96JA4 679 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 VCPIP1Q96JH7 1222 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 MFSD14AQ96MC6 490 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 XPO6Q96QU8 1125 aaKnown RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 KRT12Q99456 494 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 PDLIM7Q9NR12 457 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 HAUS2Q9NVX0 235 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 AMFRQ9UKV5 643 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 SLITRK3O94933 977 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 ADSSP30520 456 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 RFC4P35249 363 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 KLF1Q13351 362 aaPredicted RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TAZQ16635 292 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 INTS8Q75QN2 995 aaKnown RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 CCDC13Q8IYE1 715 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 C10orf67Q8IYJ2 551 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 FRMD8P1Q9BZ68 369 aaPredicted RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 AGPAT3Q9NRZ7 376 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 CNOT8Q9UFF9 292 aaKnown RBP9.51□□□□□ -0.89
CPNE8-201ENST00000331366 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 KIAA1024Q9UPX6 916 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 TRPC6Q9Y210 931 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
CPNE8-201ENST00000331366 POTEB3A0JP26 581 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 POTECB2RU33 542 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 E9PMD0 336 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 FAM86B1E9PN63 330 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 ZBED4O75132 1171 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 FAM86B2P0C5J1 330 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 NPR1P16066 1061 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 SLC1A1P43005 524 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 PRELPP51888 382 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 GALCP54803 685 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 POTEBQ6S5H4 581 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 SFR1Q86XK3 245 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 FAM133AQ8N9E0 248 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 ZNF398Q8TD17 642 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 RAPGEF5Q92565 580 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 TAF4BQ92750 862 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 GRAMD1AQ96CP6 724 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 EIF2AK1Q9BQI3 630 aaKnown RBP9.5□□□□□ -0.89
CPNE8-201ENST00000331366 PI4KBQ9UBF8 816 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 SRP68Q9UHB9 627 aaKnown RBP9.5□□□□□ -0.89
CPNE8-201ENST00000331366 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 CCDC169A6NNP5 214 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 EVI5O60447 810 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 CHRNB2P17787 502 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 KIAA1755Q5JYT7 1200 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 MFSD14BQ5SR56 506 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 CHMP6Q96FZ7 201 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 SEC16BQ96JE7 1060 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 HOMER3Q9NSC5 361 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPNE8-201ENST00000331366 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 UBAP1LF5GYI3 381 aa9.5□□□□□ -0.89
CPNE8-201ENST00000331366 EML1O00423 815 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms