RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLN8-201ENST00000331222 KIZQ2M2Z5 673 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 LRRC8EQ6NSJ5 796 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 ANKMY2Q8IV38 441 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 OSBP2Q969R2 916 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 POLR3FQ9H1D9 316 aaPredicted RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 CNOT8Q9UFF9 292 aaKnown RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 JRKLQ9Y4A0 524 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 MTM1Q13496 603 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 EPM2AIP1Q7L775 607 aaPredicted RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 BBOX1O75936 387 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 FCER1AP12319 257 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 NFKBIAP25963 317 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 AKT1P31749 480 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 ATP11CQ8NB49 1132 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 TMEM161AQ9NX61 479 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 DNAJC12Q9UKB3 198 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 CYP21A2P08686 494 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 HOXD10P28358 340 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 CHRNA5P30532 468 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 BEND6Q5SZJ8 279 aaPredicted RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 PKN3Q6P5Z2 889 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 RTKN2Q8IZC4 609 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 DCUN1D1Q96GG9 259 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 ZMAT2Q96NC0 199 aaKnown RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 TEX12Q9BXU0 123 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 LRRC53A6NM62 1247 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 A8MXQ7 604 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 RASA4BC9J798 803 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 RASA4O43374 803 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 RGS7P49802 495 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 ANGPT1Q15389 498 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 SEL1LQ9UBV2 794 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 TBX22Q9Y458 520 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 SLC8A1P32418 973 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 KCNJ6P48051 423 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 KRT31Q15323 416 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 SYTL3Q4VX76 610 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 FAM102AQ5T9C2 384 aaPredicted RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 RPAINQ86UA6 219 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 SIX5Q8N196 739 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
CLN8-201ENST00000331222 ZC4H2Q9NQZ6 224 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 PLAAQ9Y263 795 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 SNX24Q9Y343 169 aa11.24□□□□□ -0.61
CLN8-201ENST00000331222 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 POTEB3A0JP26 581 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 POTECB2RU33 542 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 LAD1O00515 517 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 GYG2O15488 501 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 HOXB7P09629 217 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 DMC1Q14565 340 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 LRRC14Q15048 493 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 LVRNQ6Q4G3 990 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 POTEBQ6S5H4 581 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 SPATA2LQ8IUW3 424 aaPredicted RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 MFN1Q8IWA4 741 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 C11orf70Q9BRQ4 267 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 MAP4P27816 1152 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 LTKP29376 864 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■■■■ 36.1
CLN8-201ENST00000331222 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 AURKCQ9UQB9 309 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 V9GYQ6 96 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 A0A0G2JLW4 131 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 TTLL4Q14679 1199 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 ACAD11Q709F0 780 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 TBC1D1Q86TI0 1168 aaPredicted RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 PDIK1LQ8N165 341 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 CCHCR1Q8TD31 782 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 VPS39Q96JC1 886 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 AK8Q96MA6 479 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 MED4Q9NPJ6 270 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 MAPK13O15264 365 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 TLR2O60603 784 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 ETFBP38117 255 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 GRAP2O75791 330 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 KCNA2P16389 499 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 ZNF157P51786 506 aaPredicted RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 TBL3Q12788 808 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
CLN8-201ENST00000331222 SRRM1Q8IYB3 904 aaKnown RBP11.23□□□□□ -0.61
CLN8-201ENST00000331222 TRIML1Q8N9V2 468 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms