RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 PRKAG3Q9UGI9 489 aa14.49□□□□□ -0.09
CCDC88C-201ENST00000331194 TAF1P21675 1872 aa14.49□□□□□ -0.09
CCDC88C-201ENST00000331194 LIN7AO14910 233 aaPredicted RBP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 AKAP3O75969 853 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 LUC7L3O95232 432 aaKnown RBP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 DIXDC1Q155Q3 683 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 SLC51AQ86UW1 340 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 NUDCD1Q96RS6 583 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 NENFQ9UMX5 172 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 LRRC42Q9Y546 428 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 ZNF804BA4D1E1 1349 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 BCL9O00512 1426 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 ARAP2Q8WZ64 1704 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 A0A1B0GUL6 1792 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 GOLGA6L10A0A0M3HER8 536 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 POTEB3A0JP26 581 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 POTECB2RU33 542 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 MARCH6O60337 910 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 UNC5CO95185 931 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 AFPP02771 609 aaKnown RBP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 PYGLP06737 847 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 TPBGLP0DKB5 382 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 GNAQP50148 359 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 POLE2P56282 527 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 KCNA1Q09470 495 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 TMEM119Q4V9L6 283 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 TNFAIP8L3Q5GJ75 292 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 POTEBQ6S5H4 581 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 TAOK1Q7L7X3 1001 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 PRUNE1Q86TP1 453 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 AMIGO3Q86WK7 504 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 GPBP1Q86WP2 473 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 OLIG1Q8TAK6 271 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 RNPEPL1Q9HAU8 725 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 USP40Q9NVE5 1235 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 GCNT4Q9P109 453 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 FRMPD2Q68DX3 1309 aaPredicted RBP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 CALB2P22676 271 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 GNA11P29992 359 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 CCNG1P51959 295 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 CTTNQ14247 550 aaKnown RBP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 SEPT2Q15019 361 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 CCDC137Q6PK04 289 aaKnown RBP14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 FAM13CQ8NE31 585 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 ERP27Q96DN0 273 aa14.48□□□□□ -0.09
CCDC88C-201ENST00000331194 BRAFP15056 766 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 VCAM1P19320 739 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 EPHB2P29323 1055 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 FOXN2P32314 431 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 PTDSS1P48651 473 aaKnown RBP14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 PPATQ06203 517 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 CAVIN4Q5BKX8 364 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 CDC42EP4Q9H3Q1 356 aaKnown RBP14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 KLHL14Q9P2G3 628 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 PCDHA3Q9Y5H8 950 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 BZW2Q9Y6E2 419 aaKnown RBP14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 NUP98P52948 1817 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 TOGARAM1Q9Y4F4 1720 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 GNA14O95837 355 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 KRT18P05783 430 aaKnown RBP14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 FERP16591 822 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 HOXD13P35453 343 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 STAT3P40763 770 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 PEX5P50542 639 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 EPHA7Q15375 998 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 GBP7Q8N8V2 638 aaPredicted RBP14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 PIGOQ8TEQ8 1089 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 CKAP2Q8WWK9 683 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 HAS1Q92839 578 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 FAM210AQ96ND0 272 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 ATP8A2Q9NTI2 1148 aa14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 CNOT7Q9UIV1 285 aaKnown RBP14.47□□□□□ -0.09
CCDC88C-201ENST00000331194 RTN3O95197 1032 aaPredicted RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 CBX6O95503 412 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 PLA2G4BP0C869 781 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 CETPP11597 493 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 CCNB1P14635 433 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 STX2P32856 288 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 CHKAP35790 457 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 PRKCIP41743 596 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 MARSP56192 900 aaKnown RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 TRIP13Q15645 432 aaPredicted RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 SPDYCQ5MJ68 293 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 CCDC105Q8IYK2 499 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 ZNF444Q8N0Y2 327 aaPredicted RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 FBF1Q8TES7 1133 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 KIAA1683Q9H0B3 1180 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 MTRF1LQ9UGC7 380 aaKnown RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 TTC7AQ9ULT0 858 aaPredicted RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 ALG6Q9Y672 507 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 FAM187AA6NFU0 413 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 MEIS1O00470 390 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 XRCC5P13010 732 aaKnown RBP14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 GBP1P32455 592 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 KYNUQ16719 465 aa14.46□□□□□ -0.09
CCDC88C-201ENST00000331194 ARSHQ5FYA8 562 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms