RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TNFAIP8L3Q5GJ75 292 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 ADAT2Q7Z6V5 191 aaKnown RBP19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 VPS36Q86VN1 386 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 MRIQ9BWK5 157 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 ZNF287Q9HBT7 754 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 FGFR1OP2Q9NVK5 253 aa19.55■□□□□ 0.72
CLSTN3-202ENST00000331148 A6NHS1 94 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 LINGO3P0C6S8 592 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 POLD1P28340 1107 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 LACTBP83111 547 aaPredicted RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 DHX34Q14147 1143 aaKnown RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 ASRGL1Q7L266 308 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 SPDYE1Q8NFV5 336 aaPredicted RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 UHMK1Q8TAS1 419 aaKnown RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 U2AF1L4Q8WU68 220 aaKnown RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 SCFD1Q8WVM8 642 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 YIPF3Q9GZM5 350 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 CCDC113Q9H0I3 377 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 SEMA4AQ9H3S1 761 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 GRHL1Q9NZI5 618 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 DIS3Q9Y2L1 958 aaKnown RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 KIF13BQ9NQT8 1826 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 EVI5O60447 810 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 TSPY3P0CV98 308 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 TSPY8P0CW00 308 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 PON1P27169 355 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 TGFB2P61812 414 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 BTNL9Q6UXG8 535 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 ZNF444Q8N0Y2 327 aaPredicted RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 NAP1L3Q99457 506 aaPredicted RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 USP40Q9NVE5 1235 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 AJAP1Q9UKB5 411 aaPredicted RBP19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 PNMA3Q9UL41 463 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 STX8Q9UNK0 236 aa19.54■□□□□ 0.72
CLSTN3-202ENST00000331148 SCN9AQ15858 1988 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 ANKRD33BA6NCL7 494 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 CETN3O15182 167 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 CRKP46108 304 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 DRG2P55039 364 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 ATP11AP98196 1134 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 MAPK7Q13164 816 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 AUHQ13825 339 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 EXOC3L4Q17RC7 722 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 TAOK1Q7L7X3 1001 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 KIAA0825Q8IV33 1275 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 FAM167BQ9BTA0 163 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 OSGEPQ9NPF4 335 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 RASAL2Q9UJF2 1139 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 NCANO14594 1321 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 TCP11X1B4DZS4 312 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 O00370 1275 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 AFPP02771 609 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 GALCP54803 685 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 EDRF1Q3B7T1 1238 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 CCDC38Q502W7 563 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 CCDC65Q8IXS2 484 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 DYDC1Q8WWB3 177 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 ZFATQ9P243 1243 aa19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
CLSTN3-202ENST00000331148 RASGRF2O14827 1237 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 EDIL3O43854 480 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 GJB6O95452 261 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 JAM2P57087 298 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 PICALMQ13492 652 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 LRRC14Q15048 493 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 TAF11Q15544 211 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 APOBEC3HQ6NTF7 200 aaKnown RBP19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 OSBPL1AQ9BXW6 950 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 CARD9Q9H257 536 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 BMP2KQ9NSY1 1161 aaPredicted RBP19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 TRIM33Q9UPN9 1127 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 FOCADQ5VW36 1801 aa19.52■□□□□ 0.72
CLSTN3-202ENST00000331148 WFS1O76024 890 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 FGFR4P22455 802 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 NR2F2P24468 414 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 CDC42EP5Q6NZY7 148 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 C16orf86Q6ZW13 317 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 SLC44A5Q8NCS7 719 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 ZDHHC15Q96MV8 337 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 ANKRD27Q96NW4 1050 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 RXFP1Q9HBX9 757 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 EMILIN3Q9NT22 766 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 ARL2BPQ9Y2Y0 163 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 DDX60LQ5H9U9 1706 aaKnown RBP19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 RIPK2O43353 540 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 CDK8P49336 464 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 ZNF211Q13398 564 aaPredicted RBP19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 HERC4Q5GLZ8 1057 aaPredicted RBP19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 MFSD5Q6N075 450 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 SPATA21Q7Z572 469 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms