RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 ASPRV1Q53RT3 343 aa12.15□□□□□ -0.46
GINS3-202ENST00000328514 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
GINS3-202ENST00000328514 RHOT2Q8IXI1 618 aa12.15□□□□□ -0.46
GINS3-202ENST00000328514 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
GINS3-202ENST00000328514 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.46
GINS3-202ENST00000328514 TRIM7Q9C029 511 aa12.15□□□□□ -0.46
GINS3-202ENST00000328514 KIF9Q9HAQ2 790 aa12.15□□□□□ -0.46
GINS3-202ENST00000328514 FGFR1OP2Q9NVK5 253 aa12.15□□□□□ -0.46
GINS3-202ENST00000328514 IGSF9BQ9UPX0 1349 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 AHCYL1O43865 530 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 ATP5HO75947 161 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 GNAZP19086 355 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 BAG6P46379 1132 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 CASP5P51878 434 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 GIT2Q14161 759 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 GLYCTKQ8IVS8 523 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 SPICE1Q8N0Z3 855 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 C12orf50Q8NA57 414 aaPredicted RBP12.14□□□□□ -0.47
GINS3-202ENST00000328514 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 MORC4Q8TE76 937 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
GINS3-202ENST00000328514 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
GINS3-202ENST00000328514 SLCO2A1Q92959 643 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 C18orf8Q96DM3 657 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 NAF1Q96HR8 494 aaKnown RBP12.14□□□□□ -0.47
GINS3-202ENST00000328514 MBOAT7Q96N66 472 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 RPS6KC1Q96S38 1066 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 ZFATQ9P243 1243 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 ANKIB1Q9P2G1 1089 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
GINS3-202ENST00000328514 CYP3A7-CYP3A51PA0A087WV96 503 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 NPHP3-ACAD11A0A0J9YXS1 232 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 TMEM120BA0PK00 339 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 EYA4O95677 639 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 NR3C1P04150 777 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 LINGO3P0C6S8 592 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 CYP3A7P24462 503 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 TNNI2P48788 182 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 PRPF4BQ13523 1007 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 CCDC38Q502W7 563 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 UBL4BQ8N7F7 174 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 MICAL1Q8TDZ2 1067 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 TMEM237Q96Q45 408 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 LRMDAQ9H2I8 198 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 RPL26L1Q9UNX3 145 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 TAF1P21675 1872 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ASTN1O14525 1302 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 PNMA6FA0A0J9YX94 578 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 POTECB2RU33 542 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 MTA2O94776 668 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 TTLL1O95922 423 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 LDHBP07195 334 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 COPB2P35606 906 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 PEX5P50542 639 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 RPS8P62241 208 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 UBAP2Q5T6F2 1119 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 TTC27Q6P3X3 843 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 DYDC1Q8WWB3 177 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ARHGEF2Q92974 986 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 COA7Q96BR5 231 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ARHGEF26Q96DR7 871 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 MAGEB18Q96M61 343 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 MKNK1Q9BUB5 465 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 GPR88Q9GZN0 384 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 TXLNGQ9NUQ3 528 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 DBR1Q9UK59 544 aaKnown RBP12.13□□□□□ -0.47
GINS3-202ENST00000328514 COG5Q9UP83 839 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ACTL7BQ9Y614 415 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 ALG6Q9Y672 507 aa12.13□□□□□ -0.47
GINS3-202ENST00000328514 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
GINS3-202ENST00000328514 SMIM23A6NLE4 172 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 A8MUI8 341 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 LDHCP07864 332 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 FGFR4P22455 802 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 RFX1P22670 979 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 CALB2P22676 271 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 RWDD2BP57060 319 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 RRP1BQ14684 758 aaKnown RBP12.12□□□□□ -0.47
GINS3-202ENST00000328514 KIF22Q14807 665 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 MTFR1Q15390 333 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 DCAF17Q5H9S7 520 aaPredicted RBP12.12□□□□□ -0.47
GINS3-202ENST00000328514 SPDYAQ5MJ70 313 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms