RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TMOD4Q9NZQ9 345 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 ARFGEF1Q9Y6D6 1849 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 PODXLO00592 558 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 GFPT2O94808 682 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 ACADSP16219 412 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 CTNNA2P26232 953 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 MTFR1Q15390 333 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 HERC4Q5GLZ8 1057 aaPredicted RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 DRAXINQ8NBI3 349 aaPredicted RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 ITFG2Q969R8 447 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 FAM84BQ96KN1 310 aaPredicted RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 MYLK2Q9H1R3 596 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 WDR35Q9P2L0 1181 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 ESYT2A0FGR8 921 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 RRP1BQ14684 758 aaKnown RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 CLUL1Q15846 466 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 TMEM154Q6P9G4 183 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 GLYCTKQ8IVS8 523 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 AGGF1Q8N302 714 aaeCLIP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 COG5Q9UP83 839 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 PITPNM2Q9BZ72 1349 aa13.76□□□□□ -0.21
CCDC60-201ENST00000327554 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
CCDC60-201ENST00000327554 E9PMD0 336 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 BAG3O95817 575 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 ABCB4P21439 1286 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 CASP5P51878 434 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 KLC1Q07866 573 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 UBE4AQ14139 1066 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 IFT43Q96FT9 208 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 MAGEB18Q96M61 343 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 TMEM237Q96Q45 408 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 NUDCD1Q96RS6 583 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 SYT11Q9BT88 431 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 CDC42EP4Q9H3Q1 356 aaKnown RBP13.75□□□□□ -0.21
CCDC60-201ENST00000327554 KCNK9Q9NPC2 374 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 CTNNAL1Q9UBT7 734 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 PTDSS1P48651 473 aaKnown RBP13.75□□□□□ -0.21
CCDC60-201ENST00000327554 HYIQ5T013 277 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 OR52E8Q6IFG1 317 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 TRMT10CQ7L0Y3 403 aaKnown RBP13.75□□□□□ -0.21
CCDC60-201ENST00000327554 SUPT20HQ8NEM7 779 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 CTNNBL1Q8WYA6 563 aaPredicted RBP13.75□□□□□ -0.21
CCDC60-201ENST00000327554 GJA10Q969M2 543 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 FAM136AQ96C01 138 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 PIGSQ96S52 555 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 AAASQ9NRG9 546 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 USP40Q9NVE5 1235 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 TRAF3IP3Q9Y228 551 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 SYNGAP1Q96PV0 1343 aa13.75□□□□□ -0.21
CCDC60-201ENST00000327554 EYA4O95677 639 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 HSPA6P17066 643 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 TAC1P20366 129 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 LMNB1P20700 586 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 HOXD13P35453 343 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 SSR1P43307 286 aaKnown RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 MARCKSL1P49006 195 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 LMNB2Q03252 620 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 CAVIN4Q5BKX8 364 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 DCAF17Q5H9S7 520 aaPredicted RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 CCDC137Q6PK04 289 aaKnown RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 CCDC25Q86WR0 208 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 KRT35Q92764 455 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 HAS1Q92839 578 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 IRAK4Q9NWZ3 460 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 GCNT4Q9P109 453 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 TP73O15350 636 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 ATP5HO75947 161 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 AKAP3O75969 853 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 RNF8O76064 485 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 ACSL3O95573 720 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 BRAFP15056 766 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 CYP11B2P19099 503 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 PRDX5P30044 214 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 FOXN2P32314 431 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 RFC5P40937 340 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 NT5C2P49902 561 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 RNF220Q5VTB9 566 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 GPBP1Q86WP2 473 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 SLC44A5Q8NCS7 719 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 SH3RF3Q8TEJ3 882 aaPredicted RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 DNAJC9Q8WXX5 260 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 INPP5DQ92835 1189 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 SLC35C1Q96A29 364 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
CCDC60-201ENST00000327554 VAT1LQ9HCJ6 419 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms