RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SLC16A4O15374 487 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 SHBGP04278 402 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 MXI1P50539 228 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 PNMA8AQ86V59 439 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 JAMLQ86YT9 394 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 NAV1Q8NEY1 1877 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 LAMB1P07942 1786 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 EP400Q96L91 3159 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 CYP26A1O43174 497 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 CALCAP01258 141 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 MMEP08473 750 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 CHRNA5P30532 468 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 JAG1P78504 1218 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 RAPGEF5Q92565 580 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 ALG3Q92685 438 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 GPRC5CQ9NQ84 441 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 MTUS1Q9ULD2 1270 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 PMS2P54278 862 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 BIRC3Q13489 604 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 SLC29A2Q14542 456 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 ZKSCAN8Q15776 578 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 QPCTQ16769 361 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 PODNQ7Z5L7 613 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 UNC45AQ9H3U1 944 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 INTS9Q9NV88 658 aaKnown RBP13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 VAV3Q9UKW4 847 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 CCPG1Q9ULG6 757 aa13.91□□□□□ -0.18
HMGCS1-201ENST00000325110 RGL2O15211 777 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 PRKCIP41743 596 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 Q4G0T1 1027 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CCDC137Q6PK04 289 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 ZNF720Q7Z2F6 126 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 USTQ9Y2C2 406 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 SUGT1Q9Y2Z0 365 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CYP3A7-CYP3A51PA0A087WV96 503 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 COMTP21964 271 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CYP3A7P24462 503 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM133BQ5BKY9 247 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 KIAA1755Q5JYT7 1200 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 MCTP2Q6DN12 878 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CPNE8Q86YQ8 564 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 MREGQ8N565 214 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 C1orf54Q8WWF1 131 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 ELAC2Q9BQ52 826 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 ERP44Q9BS26 406 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 LRRC4CQ9HCJ2 640 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 SAMD15Q9P1V8 674 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 BAIAP2L1Q9UHR4 511 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 MYH1P12882 1939 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 VAMP7P51809 220 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 XKR9Q5GH70 373 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CAPN12Q6ZSI9 719 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 ARHGEF19Q8IW93 802 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CCDC13Q8IYE1 715 aa13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 POLR3CQ9BUI4 534 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-201ENST00000325110 CHN1P15882 459 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 SEC16BQ96JE7 1060 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 ZDHHC15Q96MV8 337 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 SGPL1O95470 568 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 HARSP12081 509 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 PDE6BP35913 854 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 NOVP48745 357 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 LMBRD2Q68DH5 695 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 LRIG3Q6UXM1 1119 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 C1orf186Q6ZWK4 172 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 ANKS4BQ8N8V4 417 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 ZSWIM2Q8NEG5 633 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 EPS8L3Q8TE67 593 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 CHURC1Q8WUH1 139 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 POP1Q99575 1024 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms