RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 U2AF1L4Q8WU68 220 aaKnown RBP16.8■□□□□ 0.28
PRPF3-201ENST00000324862 JPH2Q9BR39 696 aaPredicted RBP16.8■□□□□ 0.28
PRPF3-201ENST00000324862 TRIP12Q14669 1992 aaPredicted RBP16.8■□□□□ 0.28
PRPF3-201ENST00000324862 ANKRD63C9JTQ0 380 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 FGFR4P22455 802 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 SYCP3Q8IZU3 236 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 ARRDC4Q8NCT1 418 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 STARD7Q9NQZ5 370 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
PRPF3-201ENST00000324862 TMOD1P28289 359 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
PRPF3-201ENST00000324862 MXD4Q14582 209 aaPredicted RBP16.79■□□□□ 0.28
PRPF3-201ENST00000324862 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
PRPF3-201ENST00000324862 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 CDR2LQ86X02 465 aaPredicted RBP16.79■□□□□ 0.28
PRPF3-201ENST00000324862 DIS3LQ8TF46 1054 aaKnown RBP16.79■□□□□ 0.28
PRPF3-201ENST00000324862 PCIF1Q9H4Z3 704 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
PRPF3-201ENST00000324862 FRMPD3Q5JV73 1810 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 MOXD2PA6NHM9 499 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 B4GALT5O43286 388 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 GPC3P51654 580 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 NLRP7Q8WX94 980 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 MAP7D2Q96T17 732 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 OSMRQ99650 979 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 TRPV6Q9H1D0 765 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 ST6GALNAC4Q9H4F1 302 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 PCDH10Q9P2E7 1040 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 KBTBD13C9JR72 458 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 INO80B-WBP1J3KQ70 363 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 K7ERI5 159 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 ZNF18P17022 549 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 EXOC8Q8IYI6 725 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 TMEM40Q8WWA1 233 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 ARMC5Q96C12 935 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 ZBTB45Q96K62 511 aaPredicted RBP16.78■□□□□ 0.28
PRPF3-201ENST00000324862 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 OSBPL7Q9BZF2 842 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 INO80BQ9C086 356 aaPredicted RBP16.78■□□□□ 0.28
PRPF3-201ENST00000324862 GBP3Q9H0R5 595 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 AGPAT3Q9NRZ7 376 aa16.78■□□□□ 0.28
PRPF3-201ENST00000324862 KAT6AQ92794 2004 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 SMIM35A0A1B0GVV1 85 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 DNM1LO00429 736 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 CTSHP09668 335 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 ADSSP30520 456 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 CASP4P49662 377 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 MRE11P49959 708 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 ATN1P54259 1190 aaPredicted RBP16.77■□□□□ 0.28
PRPF3-201ENST00000324862 PTGISQ16647 500 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 CDCA2Q69YH5 1023 aaPredicted RBP16.77■□□□□ 0.28
PRPF3-201ENST00000324862 ACCSQ96QU6 501 aa16.77■□□□□ 0.28
PRPF3-201ENST00000324862 TSEN34Q9BSV6 310 aaKnown RBP16.77■□□□□ 0.28
PRPF3-201ENST00000324862 TARS2Q9BW92 718 aaKnown RBP16.77■□□□□ 0.28
PRPF3-201ENST00000324862 SENP6Q9GZR1 1112 aaPredicted RBP16.77■□□□□ 0.28
PRPF3-201ENST00000324862 TYW1Q9NV66 732 aaKnown RBP16.77■□□□□ 0.28
PRPF3-201ENST00000324862 BICDL2A1A5D9 508 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 GPR32O75388 356 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 SGPL1O95470 568 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.27
PRPF3-201ENST00000324862 NR2F2P24468 414 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 PTENP60484 403 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.27
PRPF3-201ENST00000324862 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 NOC3LQ8WTT2 800 aaKnown RBP16.77■□□□□ 0.27
PRPF3-201ENST00000324862 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.27
PRPF3-201ENST00000324862 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 ADAMTS10Q9H324 1103 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 PHF24Q9UPV7 400 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 TRAF3IP3Q9Y228 551 aa16.77■□□□□ 0.27
PRPF3-201ENST00000324862 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.27
PRPF3-201ENST00000324862 PDXKO00764 312 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 HNRNPDLO14979 420 aaKnown RBP16.76■□□□□ 0.27
PRPF3-201ENST00000324862 B4GALT4O60513 344 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 NR3C1P04150 777 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 GNAT1P11488 350 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 CYP2J2P51589 502 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 MBTD1Q05BQ5 628 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 LRRC63Q05C16 580 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 ADAM9Q13443 819 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 RDH13Q8NBN7 331 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 BICD1Q96G01 975 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 KIF20AO95235 890 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 PPP1R2P41236 205 aa16.76■□□□□ 0.27
PRPF3-201ENST00000324862 PKN2Q16513 984 aaKnown RBP16.76■□□□□ 0.27
PRPF3-201ENST00000324862 CABYRO75952 493 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
PRPF3-201ENST00000324862 SERINC5Q86VE9 423 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 DHX38Q92620 1227 aaKnown RBP16.75■□□□□ 0.27
PRPF3-201ENST00000324862 NAP1L5Q96NT1 182 aaPredicted RBP16.75■□□□□ 0.27
PRPF3-201ENST00000324862 TSG101Q99816 390 aa16.75■□□□□ 0.27
PRPF3-201ENST00000324862 CRISPLD2Q9H0B8 497 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms