RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 EFHD1Q9BUP0 239 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 TRIM55Q9BYV6 548 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 ZFP69BQ9UJL9 534 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 ATP5HO75947 161 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 ZRANB2O95218 330 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 QARSP47897 775 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 ZNF394Q53GI3 561 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 C12orf60Q5U649 245 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 DSTYKQ6XUX3 929 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 TRIM15Q9C019 465 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 ORC6Q9Y5N6 252 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 A0A0G2JND7 137 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 GOLGA8MH3BSY2 632 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 SNRNP48Q6IEG0 339 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 ARHGEF1Q92888 912 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 NSUN4Q96CB9 384 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 MYL3P08590 195 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 SKIP12755 728 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 PAMP19021 973 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 NAA30Q147X3 362 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 C11orf70Q9BRQ4 267 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 CPS1P31327 1500 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 USP32Q8NFA0 1604 aa11.65□□□□□ -0.54
SNRNP200-201ENST00000323853 PDIA5Q14554 519 aa11.65□□□□□ -0.55
SNRNP200-201ENST00000323853 THOC1Q96FV9 657 aaKnown RBP11.65□□□□□ -0.55
SNRNP200-201ENST00000323853 DRC3Q9H069 523 aa11.65□□□□□ -0.55
SNRNP200-201ENST00000323853 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.55
SNRNP200-201ENST00000323853 ESYT3A0FGR9 886 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TADA3O75528 432 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TAC1P20366 129 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 PHKA2P46019 1235 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 KCNJ6P48051 423 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 ARPP19P56211 112 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 DHX34Q14147 1143 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 RASSF3Q86WH2 238 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 LRRC43Q8N309 656 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 C7orf25Q9BPX7 421 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 GCOM2Q9BZD3 368 aaPredicted RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 DDX47Q9H0S4 455 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 POLD4Q9HCU8 107 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 ADRA2BP18089 450 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 PSMC5P62195 406 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TMPRSS15P98073 1019 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 BIRC2Q13490 618 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC12A1Q13621 1099 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.64□□□□□ -0.557e-17■■■■■ 34.5
SNRNP200-201ENST00000323853 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 PFASO15067 1338 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 M0QYV0 167 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 EYA4O95677 639 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 KRT14P02533 472 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TAF1BQ53T94 588 aaPredicted RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 PODNQ7Z5L7 613 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 NSUN6Q8TEA1 469 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 RNF139Q8WU17 664 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TTC1Q99614 292 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 DIP2AQ14689 1571 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 AKR1B1P15121 316 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 MAPK6Q16659 721 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 RFFLQ8WZ73 363 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 N4BP2L2Q92802 583 aaPredicted RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 GABBR1Q9UBS5 961 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC26A4O43511 780 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 NR1I3Q14994 352 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 SWSAP1Q6NVH7 229 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 RWDD4Q6NW29 188 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 ENOSF1Q7L5Y1 443 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 ECT2Q9H8V3 914 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 MYO1CO00159 1063 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 SRGNP10124 158 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 TFDP2Q14188 446 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
SNRNP200-201ENST00000323853 CFLARO15519 480 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 TSTA3Q13630 321 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 PPP6R3Q5H9R7 873 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 TGS1Q96RS0 853 aaKnown RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 UBN1Q9NPG3 1134 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 PDXKO00764 312 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 SETSIPP0DME0 302 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 ZNF746Q6NUN9 644 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 RASGRP2Q7LDG7 609 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 ADSSL1Q8N142 457 aa11.63□□□□□ -0.55
SNRNP200-201ENST00000323853 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms