RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SFNP31947 248 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 PPATQ06203 517 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 PGM5Q15124 567 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 ARHGAP44Q17R89 818 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 LRRC31Q6UY01 552 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 CD302Q8IX05 232 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 AGPAT1Q99943 283 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 SLITRK6Q9H5Y7 841 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 PPP1R9AQ9ULJ8 1098 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 CTDP1Q9Y5B0 961 aaPredicted RBP24.23■■□□□ 1.47
PNKP-201ENST00000322344 A6NNZ2 444 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 BHMG1C9JSJ3 638 aaPredicted RBP24.23■■□□□ 1.47
PNKP-201ENST00000322344 PSMC5P62195 406 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 TUBB8Q3ZCM7 444 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 HAUS6Q7Z4H7 955 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 TAAR1Q96RJ0 339 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 PCIF1Q9H4Z3 704 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 ANKEF1Q9NU02 776 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 HSPBP1Q9NZL4 362 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 TCEAL9Q9UHQ7 104 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 USP20Q9Y2K6 914 aa24.23■■□□□ 1.47
PNKP-201ENST00000322344 KRIT1O00522 736 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 BUB1BO60566 1050 aaPredicted RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 CTNND1O60716 968 aaKnown RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 ZBED4O75132 1171 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 FAM153BP0C7A2 387 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 NCKAP1LP55160 1127 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 MCCD1P59942 119 aaPredicted RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 KRT76Q01546 638 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 FAM153CQ494X1 144 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 EPC2Q52LR7 807 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 FAM153AQ9UHL3 310 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 EXOC7Q9UPT5 735 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 ASTN2O75129 1339 aaPredicted RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 WDR64B1ANS9 1081 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 FOXN3O00409 490 aaPredicted RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 EIF2AK2P19525 551 aaKnown RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 HSPA9P38646 679 aaKnown RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 HADHBP55084 474 aaKnown RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 RPS6P62753 249 aaKnown RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 CLUL1Q15846 466 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 XRRA1Q6P2D8 792 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 RHOT2Q8IXI1 618 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 RDM1Q8NG50 284 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 HVCN1Q96D96 273 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 TEPSINQ96N21 525 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 CBWD1Q9BRT8 395 aa24.22■■□□□ 1.47
PNKP-201ENST00000322344 UBE2TQ9NPD8 197 aaPredicted RBP24.22■■□□□ 1.47
PNKP-201ENST00000322344 SART1O43290 800 aaKnown RBP24.21■■□□□ 1.47
PNKP-201ENST00000322344 DLG4P78352 724 aa24.21■■□□□ 1.47
PNKP-201ENST00000322344 C1orf131Q8NDD1 294 aaKnown RBP24.21■■□□□ 1.47
PNKP-201ENST00000322344 CCDC26Q8TAB7 109 aa24.21■■□□□ 1.47
PNKP-201ENST00000322344 OSGEPQ9NPF4 335 aa24.21■■□□□ 1.47
PNKP-201ENST00000322344 ERVK-9P63128 1117 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 PPP3CAQ08209 521 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 TCEAL1Q15170 157 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 MAATS1Q7Z4T9 603 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 PDCD2LQ9BRP1 358 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 AP1M1Q9BXS5 423 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 HOMER2Q9NSB8 354 aa24.2■■□□□ 1.47
PNKP-201ENST00000322344 PFASO15067 1338 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 ABCB4P21439 1286 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 GUCY2FP51841 1108 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 SPP2Q13103 211 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 PPP2R5EQ16537 467 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 RNF207Q6ZRF8 634 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.2■■□□□ 1.46
PNKP-201ENST00000322344 RMDN3Q96TC7 470 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 NAP1L3Q99457 506 aaPredicted RBP24.2■■□□□ 1.46
PNKP-201ENST00000322344 PXMP2Q9NR77 195 aa24.2■■□□□ 1.46
PNKP-201ENST00000322344 SEPT11Q9NVA2 429 aaKnown RBP24.2■■□□□ 1.46
PNKP-201ENST00000322344 BACH1O14867 736 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 LRRN2O75325 713 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 PPFIA4O75335 1185 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 ZNF280AP59817 542 aaPredicted RBP24.19■■□□□ 1.46
PNKP-201ENST00000322344 SKOR1P84550 965 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 PTPROQ16827 1216 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 TTMPQ5BVD1 217 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 CARD9Q9H257 536 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 IGSF9BQ9UPX0 1349 aa24.19■■□□□ 1.46
PNKP-201ENST00000322344 DDX3YO15523 660 aaKnown RBP24.18■■□□□ 1.46
PNKP-201ENST00000322344 MYCLP12524 364 aaPredicted RBP24.18■■□□□ 1.46
PNKP-201ENST00000322344 VCAM1P19320 739 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 GCLMP48507 274 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 PEX3P56589 373 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 HLTFQ14527 1009 aaKnown RBP eCLIP24.18■■□□□ 1.46
PNKP-201ENST00000322344 C1orf220Q5T0J3 134 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 JDP2Q8WYK2 163 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 ARL8AQ96BM9 186 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 LRRC45Q96CN5 670 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 TRERF1Q96PN7 1200 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 CAPS2Q9BXY5 557 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 THAP2Q9H0W7 228 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 PLEKHA4Q9H4M7 779 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 TISP43B9A030 160 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 MXI1P50539 228 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 SMTNP53814 917 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 UGCGQ16739 394 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 XKR9Q5GH70 373 aa24.18■■□□□ 1.46
PNKP-201ENST00000322344 ARHGEF19Q8IW93 802 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms